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    CG34377 [ Drosophila melanogaster ]

    Gene ID: 42608, updated on 9-May-2012
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    Summary

    Official Symbol
    CG34377provided by Flybase
    Primary source
    FLYBASE:FBgn0263117
    Locus tag
    Dmel_CG34377
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG13858; CG13859; CG13860; CG13861; Dmel\CG34377
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    Genomic context

    Location :
    94A5-94A5
    Sequence :
    Chromosome: 3R; NT_033777.2 (18135203..18149816, complement)
    See CG34377 in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene Shal K[+] channel interacting protein Neighboring gene mir-1010 stem loop Neighboring gene CG7084 gene product from transcript CG7084-RB Neighboring gene CG33721 gene product from transcript CG33721-RA Neighboring gene CG7080 gene product from transcript CG7080-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.
    5. Heterochromatic sequences in a Drosophila whole-genome shotgun assembly. Hoskins RA, et al. Genome Biol, 2002. PMID 12537574.

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:67566 BioGRID:67857 CG13625    BioGRID  PubMed Two-hybrid 
    BioGRID:67566 BioGRID:59975 CG14005    BioGRID  PubMed Two-hybrid 
    BioGRID:67566 BioGRID:59289 vfl    BioGRID  PubMed Two-hybrid 
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    General protein information

    Preferred Names
    CG34377 gene product from transcript CG34377-RB
    Names
    CG34377
    CG34377-PA
    CG34377-PB
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      18135203..18149816, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001260307.1 → NP_001247236.1  CG34377, isoform B [Drosophila melanogaster]

      Status: REVIEWED

    2. NM_142761.3 → NP_651018.2  CG34377, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VD37
      Related
      FBpp0111522
      Conserved Domains (2) summary
      smart00454
      Location:2 – 65
      Blast Score: 145
      SAM; Sterile alpha motif.
      cl15755
      Location:5 – 65
      Blast Score: 249
      SAM_superfamily; SAM (Sterile alpha motif )
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014297.2 AFH06554.1
    genomic AE014297.2 AAF55966.2
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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