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    CG6800 [ Drosophila melanogaster ]

    Gene ID: 42562, updated on 9-May-2012
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    Summary

    Official Symbol
    CG6800provided by Flybase
    Primary source
    FLYBASE:FBgn0038902
    Locus tag
    Dmel_CG6800
    Gene type
    protein coding
    RNA name
    CG6800
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    AC014407; Dmel\CG6800
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    Genomic context

    Location :
    93F9-93F9
    Sequence :
    Chromosome: 3R; NT_033777.2 (17601860..17602935)
    See CG6800 in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene metabotropic GABA-B receptor subtype 2 Neighboring gene bursicon Neighboring gene CG13418 gene product from transcript CG13418-RA Neighboring gene torso-like Neighboring gene CASK ortholog Neighboring gene mir-999 stem loop

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. A Drosophila protein-interaction map centered on cell-cycle regulators. Stanyon CA, et al. Genome Biol, 2004. PMID 15575970.
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.

    See all (12) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:67527 BioGRID:63648 CG13900    BioGRID  PubMed Two-hybrid 
    BioGRID:67527 BioGRID:63098 CG15676    BioGRID  PubMed Two-hybrid 
    BioGRID:67527 BioGRID:72486 CG17508    BioGRID  PubMed Two-hybrid 
    BioGRID:67527 BioGRID:66989 CG4221    BioGRID  PubMed Two-hybrid 
    BioGRID:67527 BioGRID:62713 CG5009    BioGRID  PubMed Two-hybrid 
    BioGRID:67527 BioGRID:64118 CG5568    BioGRID  PubMed Two-hybrid 
    BioGRID:67527 BioGRID:60452 CG5708    BioGRID  PubMed Two-hybrid 
    BioGRID:67527 BioGRID:60446 CG5731    BioGRID  PubMed Two-hybrid 
    BioGRID:67527 BioGRID:59992 Vm26Ab    BioGRID  PubMed Two-hybrid 
    BioGRID:67527 BioGRID:60833 cenG1A    BioGRID  PubMed Two-hybrid 
    BioGRID:67527 BioGRID:61396 gus    BioGRID  PubMed Two-hybrid 
    BioGRID:67527 BioGRID:64728 rols    BioGRID  PubMed Two-hybrid 
    BioGRID:67527 BioGRID:68433 spn-A    BioGRID  PubMed Two-hybrid 
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    General gene information

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    cyclin-dependent protein kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    protein serine/threonine kinase activity NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    protein phosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    protein phosphorylation NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
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    General protein information

    Preferred Names
    CG6800 gene product from transcript CG6800-RA
    Names
    CDK7-like
    CG6800
    CG6800-PA
    NP_650984.1
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      17601860..17602935
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142727.1 → NP_650984.1  CG6800 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VD82
      Related
      FBpp0083530, FBtr0084132
      Conserved Domains (2) summary
      cd07832
      Location:8 – 295
      Blast Score: 1150
      STKc_CCRK; Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase
      smart00220
      Location:9 – 288
      Blast Score: 563
      S_TKc; Serine/Threonine protein kinases, catalytic domain
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014297.2 AAF55917.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VD82.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content