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C1orf101 chromosome 1 open reading frame 101 [ Gallus gallus (chicken) ]

Gene ID: 421495, updated on 5-Mar-2024

Summary

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Symbol
C1orf101provided by CGNC
Full Name
chromosome 1 open reading frame 101provided by CGNC
Primary source
CGNC:51492
See related
Ensembl:ENSGALG00010008263
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
CATSPERE; C3H1orf101
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (34416673..34444847, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (34330959..34358857, complement)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110493 Neighboring gene COX20, cytochrome c oxidase assembly factor Neighboring gene desumoylating isopeptidase 2 Neighboring gene adenylosuccinate synthase 2 Neighboring gene C1orf100 homolog Neighboring gene uncharacterized LOC121110494

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in flagellated sperm motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sperm capacitation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CatSper complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm principal piece IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cation channel sperm-associated auxiliary subunit epsilon; cation channel sperm-associated protein subunit epsilon
Names
catsper channel auxiliary subunit epsilon

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001389404.2 → NP_001376333.2  cation channel sperm-associated auxiliary subunit epsilon

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000063
    UniProtKB/TrEMBL
    A0A8V0XZ52
    Related
    ENSGALP00010011305.1, ENSGALT00010019757.1

  2. NM_001397507.1 → NP_001384436.1  cation channel sperm-associated auxiliary subunit epsilon

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000063
    UniProtKB/TrEMBL
    A0A8V0XZ52

  3. NM_001397508.1 → NP_001384437.1  cation channel sperm-associated auxiliary subunit epsilon

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000063
    UniProtKB/TrEMBL
    A0A8V0XZ52

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    34416673..34444847 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040697100.2 → XP_040553034.1  cation channel sperm-associated protein subunit epsilon isoform X1

    UniProtKB/TrEMBL
    A0A8V0XZ52

  2. XM_040697101.2 → XP_040553035.1  cation channel sperm-associated protein subunit epsilon isoform X2

  3. XM_040697097.2 → XP_040553031.1  cation channel sperm-associated protein subunit epsilon isoform X1

    UniProtKB/TrEMBL
    A0A8V0XZ52

  4. XM_040697099.2 → XP_040553033.1  cation channel sperm-associated protein subunit epsilon isoform X1

    UniProtKB/TrEMBL
    A0A8V0XZ52

  5. XM_040697098.2 → XP_040553032.1  cation channel sperm-associated protein subunit epsilon isoform X1

    UniProtKB/TrEMBL
    A0A8V0XZ52

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    34330959..34358857 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046913890.1 → XP_046769846.1  cation channel sperm-associated protein subunit epsilon isoform X3

  2. XM_046913889.1 → XP_046769845.1  cation channel sperm-associated protein subunit epsilon isoform X3

  3. XM_046913893.1 → XP_046769849.1  cation channel sperm-associated protein subunit epsilon isoform X1

  4. XM_046913887.1 → XP_046769843.1  cation channel sperm-associated protein subunit epsilon isoform X3

  5. XM_046913883.1 → XP_046769839.1  cation channel sperm-associated protein subunit epsilon isoform X3

  6. XM_046913882.1 → XP_046769838.1  cation channel sperm-associated protein subunit epsilon isoform X3

  7. XM_046913878.1 → XP_046769834.1  cation channel sperm-associated protein subunit epsilon isoform X3

  8. XM_046913877.1 → XP_046769833.1  cation channel sperm-associated protein subunit epsilon isoform X3

  9. XM_046913895.1 → XP_046769851.1  cation channel sperm-associated protein subunit epsilon isoform X5

  10. XM_046913896.1 → XP_046769852.1  cation channel sperm-associated protein subunit epsilon isoform X6

  11. XM_046913894.1 → XP_046769850.1  cation channel sperm-associated protein subunit epsilon isoform X4

  12. XM_046913880.1 → XP_046769836.1  cation channel sperm-associated protein subunit epsilon isoform X3

  13. XM_046913891.1 → XP_046769847.1  cation channel sperm-associated protein subunit epsilon isoform X1

  14. XM_046913888.1 → XP_046769844.1  cation channel sperm-associated protein subunit epsilon isoform X3

  15. XM_046913884.1 → XP_046769840.1  cation channel sperm-associated protein subunit epsilon isoform X3

  16. XM_046913881.1 → XP_046769837.1  cation channel sperm-associated protein subunit epsilon isoform X3

  17. XM_046913876.1 → XP_046769832.1  cation channel sperm-associated protein subunit epsilon isoform X3

  18. XM_046913879.1 → XP_046769835.1  cation channel sperm-associated protein subunit epsilon isoform X3

  19. XM_046913892.1 → XP_046769848.1  cation channel sperm-associated protein subunit epsilon isoform X1

  20. XM_046913886.1 → XP_046769842.1  cation channel sperm-associated protein subunit epsilon isoform X3

  21. XM_046913885.1 → XP_046769841.1  cation channel sperm-associated protein subunit epsilon isoform X3

Nucleotide Protein Strain
Heading Accession and Version

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