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RpL10Aa Ribosomal protein L10Aa [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41811, updated on 11-Apr-2024

Summary

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Official Symbol
RpL10Aaprovided by FlyBase
Official Full Name
Ribosomal protein L10Aaprovided by FlyBase
Primary source
FLYBASE:FBgn0038281
Locus tag
Dmel_CG3843
See related
AllianceGenome:FB:FBgn0038281
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:AT11516; CG3843; Dmel\CG3843; RpL10A; Rpl10Aa
Summary
Predicted to enable RNA binding activity. Predicted to be involved in maturation of LSU-rRNA. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in follicle cell and nurse cell. Orthologous to human RPL10A (ribosomal protein L10a). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
88D10-88D10; 3-56 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (15037366..15038149)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (10863088..10863871)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45599 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44944 Neighboring gene defective proboscis extension response 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Distinct responses to rare codons in select Drosophila tissues. Allen SR, et al. Elife, 2022 May 6. PMID 35522036, Free PMC Article
  2. The utilization of small non-mammals in traumatic brain injury research: A systematic review. Zulazmi NA, et al. CNS Neurosci Ther, 2021 Apr. PMID 33539662, Free PMC Article
  3. RpL10A regulates oogenesis progression in the banana prawn Fenneropenaeus merguiensis and Drosophila melanogaster. Wonglapsuwan M, et al. Gen Comp Endocrinol, 2011 Sep 1. PMID 21726559
  4. Myc and the Tip60 chromatin remodeling complex control neuroblast maintenance and polarity in Drosophila. Rust K, et al. EMBO J, 2018 Aug 15. PMID 29997178, Free PMC Article
  5. Antagonistic pleiotropy for life-history traits at the gene expression level. Bochdanovits Z, et al. Proc Biol Sci, 2004 Feb 7. PMID 15101424, Free PMC Article

See all (36) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation TAS
Traceable Author Statement
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic large ribosomal subunit TAS
Traceable Author Statement
more info
 PubMed 
part_of large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ribosomal protein L10Aa
Names
CG3843-PA
RpL10Aa-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    15037366..15038149
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_142153.3 → NP_650410.1  ribosomal protein L10Aa [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650410.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VFE0
    Related
    FBpp0082483
    Conserved Domains (1) summary
    cl00322
    Location:3 → 216
    Ribosomal_L1; Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the L1 stalk along with 23S rRNA. In bacteria and archaea, L1 functions both as a ribosomal protein that binds rRNA, and as a translation repressor that binds ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VFE0 Q9VFE0

Gene LinkOut

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