My NCBISign In

Display Settings:

Format

Send to:

Choose Destination

    CG43162 [ Drosophila melanogaster ]

    Gene ID: 41788, updated on 9-May-2012
    Help top of page

    Summary

    Official Symbol
    CG43162provided by Flybase
    Primary source
    FLYBASE:FBgn0262718
    Locus tag
    Dmel_CG43162
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0153538.4; anon-WO0153538.5; CG33330; CG3563; Dmel\CG43162
    Help top of page

    Genomic context

    Location :
    88D3-88D3
    Sequence :
    Chromosome: 3R; NT_033777.2 (10567309..10621590)
    See CG43162 in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene CG7530 gene product from transcript CG7530-RB Neighboring gene effete Neighboring gene Senescence marker protein-30 Neighboring gene CG7362 gene product from transcript CG7362-RA Neighboring gene CG14855 gene product from transcript CG14855-RA Neighboring gene CG14856 gene product from transcript CG14856-RA

    Help top of page

    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
    Helptop of page

    Bibliography

    Related articles in PubMed

    1. Conditional switches for extracellular matrix patterning in Drosophila melanogaster. Khokhar A, et al. Genetics, 2008 Mar. PMID 18245854.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. A gain-of-function screen identifying genes required for vein formation in the Drosophila melanogaster wing. Molnar C, et al. Genetics, 2006 Nov. PMID 16980395.
    5. Gain-of-function screen for genes that affect Drosophila muscle pattern formation. Staudt N, et al. PLoS Genet, 2005 Oct. PMID 16254604.

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Help top of page

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:66862 BioGRID:61887 14-3-3zeta    BioGRID  PubMed Two-hybrid 
    BioGRID:66862 BioGRID:73152 Tango11    BioGRID  PubMed Two-hybrid 
    BioGRID:66862 BioGRID:62211 TppII    BioGRID  PubMed Two-hybrid 
    BioGRID:66862 BioGRID:61158 hk    BioGRID  PubMed Two-hybrid 
    BioGRID:66862 BioGRID:68545 spn-F    BioGRID  PubMed Two-hybrid 
    BioGRID:66862 BioGRID:57797 ttm50    BioGRID  PubMed Two-hybrid 
    BioGRID:66862 BioGRID:61941 wde    BioGRID  PubMed Two-hybrid 
    Help top of page

    General protein information

    Preferred Names
    CG43162 gene product from transcript CG43162-RA
    Names
    CG43162
    CG43162-PA
    CG43162-PB
    CG43162-PC
    CG43162-PD
    CG43162-PE
    CG43162-PF
    CG43162-PG
    Help top of page

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      10567309..10621590
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142132.3 → NP_650389.2  CG43162, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VFG3
      Related
      FBpp0082447

    2. NM_001260176.1 → NP_001247105.1  CG43162, isoform D [Drosophila melanogaster]

      Status: REVIEWED

    3. NM_001260178.1 → NP_001247107.1  CG43162, isoform F [Drosophila melanogaster]

      Status: REVIEWED

    4. NM_001260177.1 → NP_001247106.1  CG43162, isoform E [Drosophila melanogaster]

      Status: REVIEWED

    5. NM_001260179.1 → NP_001247108.1  CG43162, isoform G [Drosophila melanogaster]

      Status: REVIEWED

    6. NM_001104323.2 → NP_001097793.1  CG43162, isoform C [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6NNB4
      Related
      FBpp0112146

    7. NM_206488.2 → NP_996210.1  CG43162, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KSJ6
      Related
      FBpp0082448
    Help top of page

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014297.2 AAF55097.2
    genomic AE014297.2 AFH06423.1
    genomic AE014297.2 AFH06425.1
    genomic AE014297.2 AFH06424.1
    genomic AE014297.2 AFH06426.1
    genomic AE014297.2 ABW08675.1
    mRNA BT011377.1 AAR96169.1
    genomic AE014297.2 AAS65152.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VFG3.1 GenPept
    Help top of page

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Recent activity

      Clear Turn Off Turn On

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...