SAP30L SAP30 like [Gallus gallus (chicken)] - Gene

Summary

Symbol: SAP30Lprovided by CGNC
Full Name: SAP30 likeprovided by CGNC
Primary source: CGNC:2944
See related: Ensembl:ENSGALG00010015845
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 13

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	13	NC_052544.1 (11747437..11756333, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	13	NC_052585.1 (11761399..11770312, complement)

Chromosome 13 - NC_052544.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed
enables transcription coregulator activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of DNA-templated transcription	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of histone deacetylase complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: histone deacetylase complex subunit SAP30L

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001397472.1 → NP_001384401.1 histone deacetylase complex subunit SAP30L

Status: VALIDATED

Source sequence(s)

AJ445506, AJ445514, AM075484, BU305427, JAENSK010000256

Related

ENSGALP00010022025.1, ENSGALT00010038161.1

Conserved Domains (2) summary

pfam13866
Location:19 → 90

zf-SAP30; SAP30 zinc-finger

pfam13867
Location:109 → 161

SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

11747437..11756333 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

11761399..11770312 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)