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    CG8141 [ Drosophila melanogaster ]

    Gene ID: 41622, updated on 9-May-2012
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    Summary

    Official Symbol
    CG8141provided by Flybase
    Primary source
    FLYBASE:FBgn0038125
    Locus tag
    Dmel_CG8141
    Gene type
    protein coding
    RNA name
    CG8141
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:AT26376; Dmel\CG8141
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    Genomic context

    Location :
    87E1-87E1
    Sequence :
    Chromosome: 3R; NT_033777.2 (9017423..9018231)
    See CG8141 in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene CG8508 gene product from transcript CG8508-RA Neighboring gene CG14380 gene product from transcript CG14380-RB Neighboring gene CG8483 gene product from transcript CG8483-RA Neighboring gene CG8476 gene product from transcript CG8476-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.
    5. Heterochromatic sequences in a Drosophila whole-genome shotgun assembly. Hoskins RA, et al. Genome Biol, 2002. PMID 12537574.

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:66706 BioGRID:68334 CG14506    BioGRID  PubMed Two-hybrid 
    BioGRID:66706 BioGRID:57795 CG2709    BioGRID  PubMed Two-hybrid 
    BioGRID:66706 BioGRID:59942 CG7371    BioGRID  PubMed Two-hybrid 
    BioGRID:66706 BioGRID:66344 Pnn    BioGRID  PubMed Two-hybrid 
    BioGRID:66706 BioGRID:68545 spn-F    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG8141 gene product from transcript CG8141-RA
    Names
    CG8141
    CG8141-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      9017423..9018231
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_169496.2 → NP_731776.1  CG8141 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VFY3
      Related
      FBpp0082202, FBtr0082734
      Conserved Domains (2) summary
      pfam13923
      Location:81 – 126
      Blast Score: 84
      zf-C3HC4_2; Zinc finger, C3HC4 type (RING finger)
      cl15348
      Location:84 – 127
      Blast Score: 85
      RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014297.2 AAF54912.2
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VFY3.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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