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ZNF423 zinc finger protein 423 [ Gallus gallus (chicken) ]

Gene ID: 415738, updated on 3-Apr-2024

Summary

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Symbol
ZNF423provided by CGNC
Full Name
zinc finger protein 423provided by CGNC
Primary source
CGNC:2850
See related
Ensembl:ENSGALG00010024152
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
16
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (6303430..6538187)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (6645825..6880598)

Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene HEAT repeat containing 3 Neighboring gene CTD nuclear envelope phosphatase 1 regulatory subunit 1 Neighboring gene uncharacterized LOC107054281 Neighboring gene uncharacterized LOC121113492 Neighboring gene uncharacterized LOC112533272 Neighboring gene cerebellin 1 precursor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the expression profiles of adipogenesis-related factors, ZNF423, KLFs and FGF10, during preadipocyte differentiation and abdominal adipose tissue development in chickens. Matsubara Y, et al. Comp Biochem Physiol B Biochem Mol Biol, 2013 Jul. PMID 23603561

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The ZNF423 mRNA levels in the adipose tissue were elevated at days 10 and 20. These expression profiles of the adipogenesis-related factors in chicken are, in part, different from mammalian adipogenesis
    Title: Characterization of the expression profiles of adipogenesis-related factors, ZNF423, KLFs and FGF10, during preadipocyte differentiation and abdominal adipose tissue development in chickens.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin insulator sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 423

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    6303430..6538187
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046899701.1 → XP_046755657.1  zinc finger protein 423 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZR40
    Related
    ENSGALP00010035908.1, ENSGALT00010058943.1

  2. XM_046899702.1 → XP_046755658.1  zinc finger protein 423 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZR40
    Related
    ENSGALP00010035918.1, ENSGALT00010058953.1

  3. XM_004944184.5 → XP_004944241.2  zinc finger protein 423 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZW82, A0A8V0ZYB5
    Related
    ENSGALP00010035895.1, ENSGALT00010058930.1
    Conserved Domains (2) summary
    COG5048
    Location:229 → 635
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:175 → 195
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_414103.8 → XP_414103.4  zinc finger protein 423 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZR11, A0A8V0ZW82
    Related
    ENSGALP00010035886.1, ENSGALT00010058921.1
    Conserved Domains (2) summary
    COG5048
    Location:202 → 608
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:148 → 168
    ZF_C2H2; C2H2 Zn finger [structural motif]

  5. XM_046899704.1 → XP_046755660.1  zinc finger protein 423 isoform X4

  6. XM_046899703.1 → XP_046755659.1  zinc finger protein 423 isoform X4

    Related
    ENSGALP00010035870.1, ENSGALT00010058905.1

  7. XM_004944183.5 → XP_004944240.3  zinc finger protein 423 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZW87
    Related
    ENSGALP00010035864.1, ENSGALT00010058899.1
    Conserved Domains (2) summary
    COG5048
    Location:77 → 483
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:23 → 43
    ZF_C2H2; C2H2 Zn finger [structural motif]

  8. XM_046899705.1 → XP_046755661.1  zinc finger protein 423 isoform X4

  9. XM_004944185.5 → XP_004944242.2  zinc finger protein 423 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZW87
    Conserved Domains (2) summary
    COG5048
    Location:77 → 483
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:23 → 43
    ZF_C2H2; C2H2 Zn finger [structural motif]

RNA

  1. XR_005862958.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6645825..6880598
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046925905.1 → XP_046781861.1  zinc finger protein 423 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZR40

  2. XM_046925907.1 → XP_046781863.1  zinc finger protein 423 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZR40

  3. XM_040681108.2 → XP_040537042.1  zinc finger protein 423 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZW82, A0A8V0ZYB5
    Conserved Domains (2) summary
    COG5048
    Location:229 → 635
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:175 → 195
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_040681109.2 → XP_040537043.1  zinc finger protein 423 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZR11, A0A8V0ZW82
    Conserved Domains (2) summary
    COG5048
    Location:202 → 608
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:148 → 168
    ZF_C2H2; C2H2 Zn finger [structural motif]

  5. XM_046925906.1 → XP_046781862.1  zinc finger protein 423 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZR40

  6. XM_046925909.1 → XP_046781865.1  zinc finger protein 423 isoform X4

  7. XM_046925908.1 → XP_046781864.1  zinc finger protein 423 isoform X4

  8. XM_040681110.2 → XP_040537044.1  zinc finger protein 423 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZW87
    Conserved Domains (2) summary
    COG5048
    Location:77 → 483
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:23 → 43
    ZF_C2H2; C2H2 Zn finger [structural motif]

  9. XM_046925910.1 → XP_046781866.1  zinc finger protein 423 isoform X4

  10. XM_040681111.2 → XP_040537045.1  zinc finger protein 423 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZW87
    Conserved Domains (2) summary
    COG5048
    Location:77 → 483
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:23 → 43
    ZF_C2H2; C2H2 Zn finger [structural motif]

RNA

  1. XR_005853294.2 RNA Sequence

Nucleotide Protein Strain
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