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    MATN3 matrilin 3 [ Homo sapiens (human) ]

    Gene ID: 4148, updated on 22-May-2013
    Official Symbol
    MATN3provided by HGNC
    Official Full Name
    matrilin 3provided by HGNC
    Primary source
    HGNC:6909
    See related
    Ensembl:ENSG00000132031; HPRD:03661; MIM:602109; Vega:OTTHUMG00000151788
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    HOA; OS2; EDM5; DIPOA; OADIP
    Summary
    This gene encodes a member of von Willebrand factor A domain containing protein family. This family of proteins is thought to be involved in the formation of filamentous networks in the extracellular matrices of various tissues. This protein contains two von Willebrand factor A domains; it is present in the cartilage extracellular matrix and has a role in the development and homeostasis of cartilage and bone. Mutations in this gene result in multiple epiphyseal dysplasia. [provided by RefSeq, Jul 2008]
    Location :
    2p24-p23
    Sequence :
    Chromosome: 2; NC_000002.11 (20191813..20212455, complement)
    See MATN3 in Epigenomics, MapViewer

    Chromosome 2 - NC_000002.11Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 32 Neighboring gene WD repeat domain 35 Neighboring gene ring finger protein, transmembrane 1 pseudogene 1 Neighboring gene lysosomal protein transmembrane 4 alpha Neighboring gene ribosomal protein S16 pseudogene 2

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Multiple epiphyseal dysplasia 5

    Summary from GeneReviews: Multiple Epiphyseal Dysplasia, Dominant Go to GeneReviews

    Disease Characteristics
    Autosomal dominant multiple epiphyseal dysplasia (MED) presents early in childhood, usually with pain in the hips and/or knees after exercise. Affected children complain of fatigue with long-distance walking. Waddling gait may be present. Adult height is either in the lower range of normal or mildly shortened. The limbs are relatively short in comparison to the trunk. Pain and joint deformity progress, resulting in early-onset osteoarthritis, particularly of the large weight-bearing joints.
    Diagnosis Testing
    The diagnosis of autosomal dominant MED is based on the clinical and radiographic findings in the proband and other family members. In the initial stage of the disorder, often before the onset of clinical symptoms, delayed ossification of the epiphyses of the long tubular bones is found on radiographs. With the appearance of the epiphyses, the ossification centers are small with irregular contours, usually most pronounced in the hips and/or knees. The tubular bones may be mildly shortened. By definition, the spine is normal, although Schmorl bodies and irregular vertebral end plates may be observed. Mutations in five genes are causative: COMP, COL9A1, COL9A2, COL9A3, and MATN3. However, in approximately 10%-20% of all samples analyzed, a mutation cannot be identified in any of the five genes above, suggesting that mutations in other as-yet unidentified genes are also involved in the pathogenesis of dominant MED.
    Genetic Counseling
    Dominant MED is inherited in an autosomal dominant manner. Many individuals with dominant MED have inherited the mutant allele from one parent. The prevalence of new gene mutations is not known. Each child of an individual with dominant MED has a 50% chance of inheriting the mutation. Prenatal diagnosis of pregnancies at increased risk is possible if the disease-causing mutation has been identified in an affected family member.
    References
    Products Interactant Other Gene Complex Source Pubs Description
    O15232 P21941 MATN1    HPRD  PubMed  
    O15232 O15232 MATN3    HPRD  PubMed  
    O15232 O95460 MATN4    HPRD  PubMed  
    BioGRID:110318 BioGRID:110316 MATN1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:110318 BioGRID:110317 MATN2    BioGRID  PubMed Reconstituted Complex 
    BioGRID:110318 BioGRID:114313 MATN4    BioGRID  PubMed Reconstituted Complex 

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    extracellular matrix structural constituent TAS
    Traceable Author Statement
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    skeletal system development TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    proteinaceous extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    matrilin-3
    Names
    matrilin-3

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_008087.1 RefSeqGene

      Range
      5001..25643
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_002381.4NP_002372.1  matrilin-3 precursor

      Status: REVIEWED

      Source sequence(s)
      AC079145, AJ224741, AU121718, CA447528, Y13341
      Consensus CDS
      CCDS46226.1
      UniProtKB/Swiss-Prot
      O15232
      Related
      ENSP00000383894, OTTHUMP00000200547, ENST00000407540, OTTHUMT00000323925
      Conserved Domains (3) summary
      pfam10393
      Location:442484
      Blast Score: 165
      Matrilin_ccoil; Trimeric coiled-coil oligomerisation domain of matrilin
      pfam12662
      Location:328346
      Blast Score: 85
      cEGF; Complement Clr-like EGF-like
      cl00057
      Location:80303
      Blast Score: 756
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000002.11 Reference GRCh37.p10 Primary Assembly

      Range
      20191813..20212455, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000134.1 Alternate HuRef

      Range
      19949096..19969718, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018913.1 Alternate CHM1_1.0

      Range
      20132745..20153388, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

      Supplemental Content

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