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rcbtb1.S regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 414496, updated on 6-Oct-2023

Summary

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Official Symbol
rcbtb1.S
Official Full Name
regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 S homeolog
Primary source
Xenbase:XB-GENE-987321
Locus tag
XELAEV_18016113mg
See related
EnsemblRapid:ENSXLAG00005031026
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
rcbtb1; rcbtb1-a
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See rcbtb1.S in Genome Data Viewer
Location:
chromosome: 2S
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (140991503..141012145, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (132006390..132027100, complement)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100127287 Neighboring gene PHD finger protein 11 Neighboring gene ADP ribosylation factor like GTPase 11 S homeolog Neighboring gene EBP like S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC81035

General protein information

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Preferred Names
regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 S homeolog
Names
regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091080.1 → NP_001084549.2  regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 S homeolog

    Status: PROVISIONAL

    Source sequence(s)
    BC068656
    UniProtKB/TrEMBL
    A0A8J0PUU2, A0A974HX18
    Related
    ENSXLAP00005092973.1, ENSXLAT00005094656.1
    Conserved Domains (4) summary
    smart00225
    Location:440 → 536
    BTB; Broad-Complex, Tramtrack and Bric a brac
    cd14821
    Location:536 → 592
    SPOP_C_like; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
    pfam00415
    Location:163 → 213
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00651
    Location:429 → 533
    BTB; BTB/POZ domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    140991503..141012145 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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