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    CG3281 [ Drosophila melanogaster ]

    Gene ID: 41445, updated on 9-May-2012
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    Summary

    Official Symbol
    CG3281provided by Flybase
    Primary source
    FLYBASE:FBgn0260741
    Locus tag
    Dmel_CG3281
    Gene type
    protein coding
    RNA name
    CG3281
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    87A7-9/1; anon-87Aa; anon-WO0140519.243; Dmel\CG3281
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    Genomic context

    Location :
    87A7-87A7
    Sequence :
    Chromosome: 3R; NT_033777.2 (7786605..7788523, complement)
    See CG3281 in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene CG31211 gene product from transcript CG31211-RB Neighboring gene Heat-shock-protein-70Aa Neighboring gene Heat-shock-protein-70Ab Neighboring gene aurora Neighboring gene CG12213 gene product from transcript CG12213-RB

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci. Petesch SJ, et al. Cell, 2008 Jul 11. PMID 18614012.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. Remarkable site specificity of local transposition into the Hsp70 promoter of Drosophila melanogaster. Shilova VY, et al. Genetics, 2006 Jun. PMID 16582443.
    5. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.

    See all (16) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:66562 BioGRID:57550 CG12470    BioGRID  PubMed Two-hybrid 
    BioGRID:66562 BioGRID:61521 CG12835    BioGRID  PubMed Two-hybrid 
    BioGRID:66562 BioGRID:64172 CG7386    BioGRID  PubMed Two-hybrid 
    BioGRID:66562 BioGRID:66215 CG8159    BioGRID  PubMed Two-hybrid 
    BioGRID:66562 BioGRID:72324 fs(2)ltoPP43    BioGRID  PubMed Two-hybrid 
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    General gene information

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG3281 gene product from transcript CG3281-RA
    Names
    CG3281
    CG3281-PA
    anon-87Aa
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      7786605..7788523, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141875.2 → NP_650132.1  CG3281 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VGG0
      Related
      FBpp0081985, FBtr0082511
      Conserved Domains (3) summary
      TIGR02390
      Location:248 – 300
      Blast Score: 89
      RNA_pol_rpoA1; DNA-directed RNA polymerase subunit A'
      pfam13465
      Location:391 – 416
      Blast Score: 99
      zf-H2C2_2; Zinc-finger double domain
      cl07874
      Location:14 – 92
      Blast Score: 107
      zf-AD; Zinc-finger associated domain (zf-AD)
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA AY052029.1 AAK93453.1
    genomic AE014297.2 AAF54722.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VGG0.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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