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LOC413495 mediator of RNA polymerase II transcription subunit 27 [ Apis mellifera (honey bee) ]

Gene ID: 413495, updated on 9-Nov-2023

Summary

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Gene symbol
LOC413495
Gene description
mediator of RNA polymerase II transcription subunit 27
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
MED27; GB42452
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Genomic context

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Location:
chromosome: LG7
Exon count:
5
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG7 NC_037644.1 (9606604..9608394, complement)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG7 NC_007076.3 (10513070..10515018)

Linkage Group LG7 - NC_037644.1Genomic Context describing neighboring genes Neighboring gene vesicle-associated membrane protein-associated protein B Neighboring gene glucose transporter type 1 Neighboring gene protein VAC14 homolog Neighboring gene inhibitor of nuclear factor kappa-B kinase subunit epsilon

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
  2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
  4. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 27

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037644.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    9606604..9608394 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_396939.6 → XP_396939.2  mediator of RNA polymerase II transcription subunit 27

    See identical proteins and their annotated locations for XP_396939.2

    UniProtKB/TrEMBL
    A0A7M7TFM5, A0A8B9AZS4
    Conserved Domains (1) summary
    pfam11571
    Location:215 → 296
    Med27; Mediator complex subunit 27
Nucleotide Protein Strain
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