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    fau [ Drosophila melanogaster ]

    Gene ID: 41291, updated on 26-Jan-2012
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    Summary

    Official Symbol
    fauprovided by Flybase
    Primary source
    FLYBASE:FBgn0020439
    Locus tag
    Dmel_CG6544
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:HL07933; CG6544; Dmel\CG6544; Fau
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    Genomic context

    Location :
    86C6-86C6
    Sequence :
    Chromosome: 3R; NT_033777.2 (6593888..6603090, complement)
    See fau in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene Mediator complex subunit 7 Neighboring gene Chromosome associated protein H2 Neighboring gene Transcription factor TFIIFbeta Neighboring gene CG14686 gene product from transcript CG14686-RA Neighboring gene CG42633 gene product from transcript CG42633-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. The transcriptional response of Drosophila melanogaster to infection with the sigma virus (Rhabdoviridae). Carpenter J, et al. PLoS One, 2009 Aug 31. PMID 19718442.
    2. Accentuate the negative: proteome comparisons using the negative proteome database. Reiter LT, et al. Fly (Austin), 2007 May-Jun. PMID 18820470.
    3. Genomic and functional studies of Drosophila sex hierarchy regulated gene expression in adult head and nervous system tissues. Goldman TD, et al. PLoS Genet, 2007 Nov. PMID 18039034.
    4. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    5. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:66435 BioGRID:65282 CG14353    BioGRID  PubMed Two-hybrid 
    BioGRID:66435 BioGRID:59816 CG15422    BioGRID  PubMed Two-hybrid 
    BioGRID:66435 BioGRID:67401 CG4335    BioGRID  PubMed Two-hybrid 
    BioGRID:66435 BioGRID:67091 CG8907    BioGRID  PubMed Two-hybrid 
    BioGRID:66435 BioGRID:57700 Edem1    BioGRID  PubMed Two-hybrid 
    BioGRID:66435 BioGRID:69415 Fer2LCH    BioGRID  PubMed Two-hybrid 
    BioGRID:66435 BioGRID:68606 RpS3A    BioGRID  PubMed Two-hybrid 
    BioGRID:66435 BioGRID:58951 Traf-like    BioGRID  PubMed Two-hybrid 
    BioGRID:66435 BioGRID:61258 barr    BioGRID  PubMed Two-hybrid 
    BioGRID:66435 BioGRID:57745 crn    BioGRID  PubMed Two-hybrid 
    BioGRID:66435 BioGRID:59517 drongo    BioGRID  PubMed Two-hybrid 
    BioGRID:66435 BioGRID:63699 msd5    BioGRID  PubMed Two-hybrid 
    BioGRID:66435 BioGRID:60572 porin    BioGRID  PubMed Two-hybrid 
    BioGRID:66435 BioGRID:58765 rut    BioGRID  PubMed Two-hybrid 
    BioGRID:66435 BioGRID:65184 sinah    BioGRID  PubMed Two-hybrid 
    BioGRID:66435 BioGRID:68310 yemalpha    BioGRID  PubMed Two-hybrid 
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    General gene information

    Markers

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    response to anoxia IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
    		  
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    General protein information

    Preferred Names
    CG6544 gene product from transcript CG6544-RA
    Names
    CG6544-PA
    CG6544-PB
    CG6544-PC
    CG6544-PD
    CG6544-PE
    fau
    fau-PA
    fau-PB
    fau-PC
    fau-PD
    fau-PE
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      6593888..6603090, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141758.4 → NP_650015.3  fau, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VGX3
      Related
      FBpp0081783

    2. NM_001202280.1 → NP_001189209.1  fau, isoform E [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      B9EQU5

    3. NM_169360.2 → NP_731504.1  fau, isoform D [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VGX3
      Related
      FBpp0081785

    4. NM_169361.2 → NP_731505.1  fau, isoform C [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VGX3
      Related
      FBpp0081784

    5. NM_169362.2 → NP_731506.1  fau, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VGX3
      Related
      FBpp0081782
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA AY060997.1 AAL28545.1
    genomic AE014297.2 AAF54549.3
    mRNA BT058020.1 ACM16737.1
    genomic AE014297.2 ADV37300.1
    genomic AE014297.2 AAF54550.1
    mRNA AF154418.1 AAD38397.1
    genomic AE014297.2 AAF54551.1
    mRNA AY119569.1 AAM50223.1
    genomic AE014297.2 AAF54552.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q9VGX3.3 GenPept
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content