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    CG8319 [ Drosophila melanogaster ]

    Gene ID: 41165, updated on 9-May-2012
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    Summary

    Official Symbol
    CG8319provided by Flybase
    Primary source
    FLYBASE:FBgn0037722
    Locus tag
    Dmel_CG8319
    Gene type
    protein coding
    RNA name
    CG8319
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG8319
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    Genomic context

    Location :
    85E1-85E1
    Sequence :
    Chromosome: 3R; NT_033777.2 (5453043..5454398)
    See CG8319 in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene CG8312 gene product from transcript CG8312-RA Neighboring gene CG9427 gene product from transcript CG9427-RA Neighboring gene Calreticulin Neighboring gene Spermidine Synthase Neighboring gene Sex comb on midleg

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.
    5. Genome-wide analyses of steroid- and radiation-triggered programmed cell death in Drosophila. Lee CY, et al. Curr Biol, 2003 Feb 18. PMID 12593803.

    See all (10) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:66324 BioGRID:62827 CG15073    BioGRID  PubMed Two-hybrid 
    BioGRID:66324 BioGRID:67175 CG17802    BioGRID  PubMed Two-hybrid 
    BioGRID:66324 BioGRID:65882 CG2926    BioGRID  PubMed Two-hybrid 
    BioGRID:66324 BioGRID:66004 CG31482    BioGRID  PubMed Two-hybrid 
    BioGRID:66324 BioGRID:60661 CG6686    BioGRID  PubMed Two-hybrid 
    BioGRID:66324 BioGRID:65440 CG7757    BioGRID  PubMed Two-hybrid 
    BioGRID:66324 BioGRID:68422 CG7928    BioGRID  PubMed Two-hybrid 
    BioGRID:66324 BioGRID:62088 Oda    BioGRID  PubMed Two-hybrid 
    BioGRID:66324 BioGRID:60919 esg    BioGRID  PubMed Two-hybrid 
    BioGRID:66324 BioGRID:65820 opa    BioGRID  PubMed Two-hybrid 
    BioGRID:66324 BioGRID:66636 trus    BioGRID  PubMed Two-hybrid 
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    General gene information

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
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    General protein information

    Preferred Names
    CG8319 gene product from transcript CG8319-RA
    Names
    CG8319
    CG8319-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      5453043..5454398
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141663.4 → NP_649920.2  CG8319 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VHA4
      Related
      FBpp0081555
      Conserved Domains (3) summary
      COG5048
      Location:153 – 368
      Blast Score: 97
      COG5048; FOG: Zn-finger [General function prediction only]
      pfam13465
      Location:308 – 332
      Blast Score: 91
      zf-H2C2_2; Zinc-finger double domain
      cl07874
      Location:4 – 79
      Blast Score: 153
      zf-AD; Zinc-finger associated domain (zf-AD)
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA BT016045.1 AAV36930.1
    genomic AE014297.2 AAF54415.3
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VHA4.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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