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    MAGOH mago-nashi homolog, proliferation-associated (Drosophila) [ Homo sapiens ]

    Gene ID: 4116, updated on 19-May-2012

    Summary

    Official Symbol
    MAGOHprovided by HGNC
    Official Full Name
    mago-nashi homolog, proliferation-associated (Drosophila)provided by HGNC
    Primary source
    HGNC:6815
    Locus tag
    RP5-1024G6.4
    See related
    Ensembl:ENSG00000162385; HPRD:04005; MIM:602603; Vega:OTTHUMG00000008932
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    MAGOH1; MAGOHA
    Summary
    Drosophila that have mutations in their mago nashi (grandchildless) gene produce progeny with defects in germplasm assembly and germline development. This gene encodes the mammalian mago nashi homolog. In mammals, mRNA expression is not limited to the germ plasm, but is expressed ubiquitously in adult tissues and can be induced by serum stimulation of quiescent fibroblasts. [provided by RefSeq, Jul 2008]

    Genomic context

    Location :
    1p32.3
    Sequence :
    Chromosome: 1; NC_000001.10 (53692564..53704282, complement)
    See MAGOH in Epigenomics, MapViewer

    Chromosome 1 - NC_000001.10Genomic Context describing neighboring genes Neighboring gene carnitine palmitoyltransferase 2 pseudogene Neighboring gene carnitine palmitoyltransferase 2 Neighboring gene chromosome 1 open reading frame 123 Neighboring gene uncharacterized LOC100507564 Neighboring gene low density lipoprotein receptor-related protein 8, apolipoprotein e receptor Neighboring gene solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 pseudogene 1

    Genomic regions, transcripts, and products

    Bibliography

    Related articles in PubMed

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    P61326 Q86V81 ALYREF    HPRD  PubMed  
    P61326 P38919 EIF4A3    HPRD  PubMed  
    P61326 O94829 IPO13    HPRD  PubMed  
    P61326 P46821 MAP1B    HPRD  PubMed  
    P61326 Q9UBU9 NXF1    HPRD  PubMed  
    P61326 Q9Y5S9 RBM8A    HPRD  PubMed  
    P61326 P27348 YWHAQ    HPRD  PubMed  
    BioGRID:110290 BioGRID:115119 EIF4A3    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:110290 BioGRID:115025 IPO13    BioGRID  PubMed Reconstituted Complex 
    BioGRID:110290 BioGRID:115745 NXF1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:110290 BioGRID:115265 RBM8A    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex; Two-hybrid 
    BioGRID:110290 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:110290 BioGRID:116168 YWHAQ    BioGRID  PubMed Affinity Capture-MS 

    General gene information

    Markers

    Homology

    Pathways from BioSystems

    • Cleavage of Growing Transcript in the Termination Region, organism-specific biosystem (from REACTOME)
      Cleavage of Growing Transcript in the Termination Region, organism-specific biosystemThis section includes the cleavage of both polyadenylated and non-polyadenylated transcripts. In the former case polyadenylation has to precede transcript cleavage, while in the latter case there is ...
    • Exon junction complex (EJC), organism-specific biosystem (from KEGG)
      Exon junction complex (EJC), organism-specific biosystemStructural complex; Genetic information processing; RNA processing
    • Gene Expression, organism-specific biosystem (from REACTOME)
      Gene Expression, organism-specific biosystemGene Expression covers the pathways by which genomic DNA is transcribed to yield RNA, the regulation of these transcription processes, and the pathways by which newly-made RNA Transcripts are process...
    • Nonsense Mediated Decay Enhanced by the Exon Junction Complex, organism-specific biosystem (from REACTOME)
      Nonsense Mediated Decay Enhanced by the Exon Junction Complex, organism-specific biosystemDuring normal translation termination eRF3 associates with the ribosome and then interacts with PABP bound to the polyadenylate tail of the mRNA to release the ribosome and allow a new round of trans...
    • Nonsense-Mediated Decay, organism-specific biosystem (from REACTOME)
      Nonsense-Mediated Decay, organism-specific biosystemThe Nonsense-Mediated Decay (NMD) pathway activates the destruction of mRNAs containing premature termination codons (PTCs) (reviewed in Isken and Maquat 2007, Chang et al. 2007, Behm-Ansmant et al. ...
    • Processing of Capped Intron-Containing Pre-mRNA, organism-specific biosystem (from REACTOME)
      Processing of Capped Intron-Containing Pre-mRNA, organism-specific biosystemCo-transcriptional pre-mRNA splicing is not obligatory. Pre-mRNA splicing begins co-transcriptionally and often continues post-transcriptionally. Human genes contain an average of nine introns per ge...
    • RNA Polymerase II Transcription, organism-specific biosystem (from REACTOME)
      RNA Polymerase II Transcription, organism-specific biosystem
      RNA Polymerase II Transcription
    • RNA Polymerase II Transcription Termination, organism-specific biosystem (from REACTOME)
      RNA Polymerase II Transcription Termination, organism-specific biosystemThe detailed annotation of this section will be completed in the next release.
    • RNA transport, organism-specific biosystem (from KEGG)
      RNA transport, organism-specific biosystemRNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) ...
    • RNA transport, conserved biosystem (from KEGG)
      RNA transport, conserved biosystemRNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) ...
    • Spliceosome, organism-specific biosystem (from KEGG)
      Spliceosome, organism-specific biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...
    • Spliceosome, conserved biosystem (from KEGG)
      Spliceosome, conserved biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...
    • Transport of Mature Transcript to Cytoplasm, organism-specific biosystem (from REACTOME)
      Transport of Mature Transcript to Cytoplasm, organism-specific biosystemTransport of mRNA through the Nuclear Pore Complex (NPC) is a dynamic process involving distinct machinery and receptor subsets. The separation of the two compartments and the regulation of this tran...
    • Transport of Mature mRNA derived from an Intron-Containing Transcript, organism-specific biosystem (from REACTOME)
      Transport of Mature mRNA derived from an Intron-Containing Transcript, organism-specific biosystemTransport of mRNA from the nucleus to the cytoplasm, where it is translated into protein, is highly selective and closely coupled to correct RNA processing. This coupling is achieved by the nuclear p...
    • mRNA 3'-end processing, organism-specific biosystem (from REACTOME)
      mRNA 3'-end processing, organism-specific biosystemThe 3' ends of eukaryotic mRNAs are generated by posttranscriptional processing of an extended primary transcript. For almost all RNAs, 3'-end processing consists of two steps: (i) the mRNA is first ...
    • mRNA Splicing, organism-specific biosystem (from REACTOME)
      mRNA Splicing, organism-specific biosystemThe process in which excision of introns from the primary transcript of messenger RNA (mRNA) is followed by ligation of the two exon termini exposed by removal of each intron, is called mRNA splicing...
    • mRNA Splicing - Major Pathway, organism-specific biosystem (from REACTOME)
      mRNA Splicing - Major Pathway, organism-specific biosystemThe splicing of pre-mRNA occurs within a large, very dynamic complex, designated the 'spliceosome'. The 50-60S spliceosomes are estimated to be 40-60 nm in diameter, and have molecular weights in the...
    • mRNA surveillance pathway, organism-specific biosystem (from KEGG)
      mRNA surveillance pathway, organism-specific biosystemThe mRNA surveillance pathway is a quality control mechanism that detects and degrades abnormal mRNAs. These pathways include nonsense-mediated mRNA decay (NMD), nonstop mRNA decay (NSD), and no-go ...
    • mRNA surveillance pathway, conserved biosystem (from KEGG)
      mRNA surveillance pathway, conserved biosystemThe mRNA surveillance pathway is a quality control mechanism that detects and degrades abnormal mRNAs. These pathways include nonsense-mediated mRNA decay (NMD), nonstop mRNA decay (NSD), and no-go ...

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    RNA metabolic process TAS
    Traceable Author Statement
    more info
     
    RNA splicing TAS
    Traceable Author Statement
    more info
     
    gene expression TAS
    Traceable Author Statement
    more info
     
    mRNA 3'-end processing TAS
    Traceable Author Statement
    more info
     
    mRNA export from nucleus TAS
    Traceable Author Statement
    more info
     
    mRNA metabolic process TAS
    Traceable Author Statement
    more info
     
    nuclear mRNA splicing, via spliceosome IC
    Inferred by Curator
    more info
    PubMed 
    nuclear mRNA splicing, via spliceosome TAS
    Traceable Author Statement
    more info
     
    nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS
    Traceable Author Statement
    more info
     
    regulation of translation IEA
    Inferred from Electronic Annotation
    more info
     
    termination of RNA polymerase II transcription TAS
    Traceable Author Statement
    more info
     
    transcription from RNA polymerase II promoter TAS
    Traceable Author Statement
    more info
     
    transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    catalytic step 2 spliceosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytosol TAS
    Traceable Author Statement
    more info
     
    exon-exon junction complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nuclear speck IEA
    Inferred from Electronic Annotation
    more info
     
    nucleoplasm TAS
    Traceable Author Statement
    more info
     
    nucleus NAS
    Non-traceable Author Statement
    more info
     

    General protein information

    Preferred Names
    protein mago nashi homolog
    Names
    protein mago nashi homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_002370.3NP_002361.1  protein mago nashi homolog

      Status: REVIEWED

      Source sequence(s)
      AF035940, AF067173, BX283982
      Consensus CDS
      CCDS577.1
      UniProtKB/Swiss-Prot
      P61326
      Related
      ENSP00000360525, OTTHUMP00000010485, ENST00000371470, OTTHUMT00000024730
      Conserved Domains (1) summary
      cd11295
      Location:4146
      Blast Score: 804
      Mago_nashi; Mago nashi proteins, integral members of the exon junction complex

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000001.10 Reference GRCh37.p5 Primary Assembly

      Range
      53692564..53704282, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000133.1 Alternate HuRef

      Range
      51808218..51819958, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AL606760.9 CAI18913.1
      CAI18914.1
    genomic CH471059.2 EAX06747.1
      EAX06748.1
    mRNA AF035940.1 AAC39606.1
    mRNA AF067173.1 AAD32457.1
    mRNA AF086246.1 None
    mRNA AK297895.1 BAG60216.1
    mRNA AK312113.1 BAG35049.1
    mRNA BC018211.1 AAH18211.1
    mRNA BX283982.1 None
    other-genetic DQ891289.2 ABM82215.1
    other-genetic DQ894473.2 ABM85399.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    P61326.1 GenPept UniProtKB/Swiss-Prot:P61326

      Supplemental Content

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