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    CG8159 [ Drosophila melanogaster ]

    Gene ID: 41040, updated on 4-Feb-2012
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    Summary

    Official Symbol
    CG8159provided by Flybase
    Primary source
    FLYBASE:FBgn0037619
    Locus tag
    Dmel_CG8159
    Gene type
    protein coding
    RNA name
    CG8159
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG8159
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    Genomic context

    Location :
    85A9-85A9
    Sequence :
    Chromosome: 3R; NT_033777.2 (4552576..4554092)
    See CG8159 in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene CG8145 gene product from transcript CG8145-RA Neighboring gene CG11762 gene product from transcript CG11762-RA Neighboring gene CG9793 gene product from transcript CG9793-RA Neighboring gene CG9797 gene product from transcript CG9797-RA Neighboring gene CG8202 gene product from transcript CG8202-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Mago Nashi, Tsunagi/Y14, and Ranshi form a complex that influences oocyte differentiation in Drosophila melanogaster. Lewandowski JP, et al. Dev Biol, 2010 Mar 15. PMID 20045686.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:66215 BioGRID:70573 Adf1    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:64169 CG10274    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:57550 CG12470    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:61182 CG17568    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:60369 CG17855    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:72850 CG18764    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:66562 CG3281    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:65534 CG5078    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:66895 CG6654    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:64555 CG6707    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:61438 CG7856    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:66215 CG8159    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:62150 CG8569    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:59010 CG9099    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:58538 CkIIbeta    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:66148 DNApol-iota    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:68008 RASSF8    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:72729 Spt5    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:68426 Sry-beta    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:67271 Xrp1    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:59621 aop    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:59522 aru    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:65723 mael    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:60814 p38b    BioGRID  PubMed Two-hybrid 
    BioGRID:66215 BioGRID:62424 row    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG8159 gene product from transcript CG8159-RB
    Names
    CG8159
    CG8159-PB
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      4552576..4554092
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141566.2 → NP_649823.2  CG8159 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VHM5
      Related
      FBpp0290412, FBtr0301194
      Conserved Domains (3) summary
      pfam13465
      Location:291 – 315
      Blast Score: 88
      zf-H2C2_2; Zinc-finger double domain
      cl07874
      Location:5 – 78
      Blast Score: 145
      zf-AD; Zinc-finger associated domain (zf-AD)
      cl09952
      Location:304 – 328
      Blast Score: 80
      zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014297.2 AAF54278.2
    mRNA BT125982.1 ADX35961.1
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content