These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
Genomic
-
NG_016963.1 RefSeqGene
- Range
- 5001..80442
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001127217.2 → NP_001120689.1 mothers against decapentaplegic homolog 9 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (a) represents the longer transcript and encodes the longer isoform (a).
- Source sequence(s)
-
AL138706, BC011559, CN291481, D83760
- Consensus CDS
-
CCDS45032.1
- UniProtKB/Swiss-Prot
-
O15198
- Related
- ENSP00000369154, ENST00000379826
- Conserved Domains (2) summary
-
- cd10490
Location:13 – 136
Blast Score: 678
- MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
- cl00056
Location:267 – 467
Blast Score: 1104
- MH2; C-terminal Mad Homology 2 (MH2) domain
-
NM_005905.5 → NP_005896.1 mothers against decapentaplegic homolog 9 isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (b) lacks an alternate in-frame exon, compared to variant a, resulting in a shorter protein (isoform b), compared to isoform a.
- Source sequence(s)
-
AL138706, BC011559, CN291481
- Consensus CDS
-
CCDS9360.1
- UniProtKB/Swiss-Prot
-
O15198
- Related
- ENSP00000239885, OTTHUMP00000178565, ENST00000350148, OTTHUMT00000044526
- Conserved Domains (2) summary
-
- cd10490
Location:13 – 136
Blast Score: 675
- MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
- cl00056
Location:230 – 430
Blast Score: 1100
- MH2; C-terminal Mad Homology 2 (MH2) domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000013.10 Reference GRCh37.p5 Primary Assembly
- Range
- 37418968..37494409, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000145.1 Alternate HuRef
- Range
- 18230428..18265347, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)