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    CG1142 [ Drosophila melanogaster ]

    Gene ID: 40894, updated on 21-Jan-2012
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    Summary

    Official Symbol
    CG1142provided by Flybase
    Primary source
    FLYBASE:FBgn0037504
    Locus tag
    Dmel_CG1142
    Gene type
    protein coding
    RNA name
    CG1142
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG1142
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    Genomic context

    Location :
    84D8-84D8
    Sequence :
    Chromosome: 3R; NT_033777.2 (3298176..3299496, complement)
    See CG1142 in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene transfer RNA:val3b:84Da Neighboring gene transfer RNA:val3b:84Dc Neighboring gene ncRNA Neighboring gene transfer RNA:val3b:84Dd Neighboring gene small non-messenger RNA 331

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. Genome-wide analyses of two families of snoRNA genes from Drosophila melanogaster, demonstrating the extensive utilization of introns for coding of snoRNAs. Huang ZP, et al. RNA, 2005 Aug. PMID 15987805.
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.

    See all (11) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:66085 BioGRID:62726 CG14490    BioGRID  PubMed Two-hybrid 
    BioGRID:66085 BioGRID:58346 CG3099    BioGRID  PubMed Two-hybrid 
    BioGRID:66085 BioGRID:66986 CG3303    BioGRID  PubMed Two-hybrid 
    BioGRID:66085 BioGRID:62428 CG8079    BioGRID  PubMed Two-hybrid 
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    General gene information

    Homology

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    General protein information

    Preferred Names
    CG1142 gene product from transcript CG1142-RA
    Names
    CG1142
    CG1142-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      3298176..3299496, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_176415.1 → NP_788592.1  CG1142 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8STI6
      Related
      FBpp0081082, FBtr0081559
      Conserved Domains (1) summary
      pfam08698
      Location:161 – 254
      Blast Score: 268
      Fcf2; Fcf2 pre-rRNA processing
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA AY071451.1 AAL49073.1
    mRNA AY071453.1 AAL49075.1
    genomic AE014297.2 AAO41511.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q8STI6.1 GenPept
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content