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Sala_2019 succinyl-diaminopimelate desuccinylase [ Sphingopyxis alaskensis RB2256 ]

Gene ID: 4079956, discontinued on 4-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:

Summary

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Gene symbol
Sala_2019
Gene description
succinyl-diaminopimelate desuccinylase
Locus tag
Sala_2019
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sphingopyxis alaskensis RB2256 (strain: RB2256)
Lineage
Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_008048.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Names
succinyl-diaminopimelate desuccinylase
YP_617063.1
  • dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_008048.1 Reference assembly

    Range
    2129149..2130282 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_617063.1 succinyl-diaminopimelate desuccinylase [Sphingopyxis alaskensis RB2256]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q1GRJ2.1

Gene LinkOut

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