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Pkc protein kinase C [ Apis mellifera (honey bee) ]

Gene ID: 406106, updated on 9-Nov-2023

Summary

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Gene symbol
Pkc
Gene description
protein kinase C
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB17972; GB43222
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Genomic context

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Location:
chromosome: LG11
Exon count:
14
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG11 NC_037648.1 (16105584..16127257)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG11 NC_007080.3 (13970890..13992966, complement)

Linkage Group LG11 - NC_037648.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107965260 Neighboring gene cationic amino acid transporter 2 Neighboring gene uncharacterized LOC107965261 Neighboring gene uncharacterized LOC113219118 Neighboring gene BMP-binding endothelial regulator protein Neighboring gene protein PTHB1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Concentrated expression of Ca2+/ calmodulin-dependent protein kinase II and protein kinase C in the mushroom bodies of the brain of the honeybee Apis mellifera L. Kamikouchi A, et al. J Comp Neurol, 2000 Feb 21. PMID 10701869
  2. Annotated expressed sequence tags and cDNA microarrays for studies of brain and behavior in the honey bee. Whitfield CW, et al. Genome Res, 2002 Apr. PMID 11932240, Free PMC Article
  3. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  4. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
  5. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables diacylglycerol-dependent serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein kinase C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001134948.1 → NP_001128420.1  protein kinase C

    Status: VALIDATED

    Source sequence(s)
    AADG06001918
    UniProtKB/TrEMBL
    A0A7M6UV25, A0A8B6WZE2
    Conserved Domains (4) summary
    cd04026
    Location:168 → 297
    C2_PKC_alpha_gamma; C2 domain in Protein Kinase C (PKC) alpha and gamma
    cd05587
    Location:347 → 666
    STKc_cPKC; Catalytic domain of the Serine/Threonine Kinase, Classical (or Conventional) Protein Kinase C
    cd20833
    Location:44 → 101
    C1_cPKC_rpt1; first protein kinase C conserved region 1 (C1 domain) found in the classical (or conventional) protein kinase C (cPKC) family
    cd20836
    Location:111 → 164
    C1_cPKC_rpt2; second protein kinase C conserved region 1 (C1 domain) found in the classical (or conventional) protein kinase C (cPKC) family

RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037648.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    16105584..16127257
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006570268.3 → XP_006570331.1  protein kinase C isoform X1

    See identical proteins and their annotated locations for XP_006570331.1

    UniProtKB/TrEMBL
    A0A7M7GYZ1, A0A8B6Z827
    Conserved Domains (4) summary
    cd04026
    Location:167 → 296
    C2_PKC_alpha_gamma; C2 domain in Protein Kinase C (PKC) alpha and gamma
    cd05587
    Location:346 → 665
    STKc_cPKC; Catalytic domain of the Serine/Threonine Kinase, Classical (or Conventional) Protein Kinase C
    cd20833
    Location:44 → 101
    C1_cPKC_rpt1; first protein kinase C conserved region 1 (C1 domain) found in the classical (or conventional) protein kinase C (cPKC) family
    cd20836
    Location:110 → 163
    C1_cPKC_rpt2; second protein kinase C conserved region 1 (C1 domain) found in the classical (or conventional) protein kinase C (cPKC) family

  2. XM_016914657.2 → XP_016770146.1  protein kinase C isoform X2

    UniProtKB/TrEMBL
    A0A7M7ITH2, A0A8B7KMS2
Nucleotide Protein Strain
Heading Accession and Version

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