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    CG14647 [ Drosophila melanogaster ]

    Gene ID: 40558, updated on 10-May-2012
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    Summary

    Official Symbol
    CG14647provided by Flybase
    Primary source
    FLYBASE:FBgn0037244
    Locus tag
    Dmel_CG14647
    Gene type
    protein coding
    RNA name
    CG14647
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG14647
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    Genomic context

    Location :
    82A5-82A5
    Sequence :
    Chromosome: 3R; NT_033777.2 (226212..227739)
    See CG14647 in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene CG14646 gene product from transcript CG14646-RA Neighboring gene CG34112 gene product from transcript CG34112-RB Neighboring gene CG9855 gene product from transcript CG9855-RA Neighboring gene CG9853 gene product from transcript CG9853-RB Neighboring gene CG14648 gene product from transcript CG14648-RA Neighboring gene CG32944 gene product from transcript CG32944-RE

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. A late phase of germ plasm accumulation during Drosophila oogenesis requires lost and rumpelstiltskin. Sinsimer KS, et al. Development, 2011 Aug. PMID 21752933.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.

    See all (10) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:65778 BioGRID:65778 CG14647    BioGRID  PubMed Two-hybrid 
    BioGRID:65778 BioGRID:73158 CG30417    BioGRID  PubMed Two-hybrid 
    BioGRID:65778 BioGRID:65803 CG31534    BioGRID  PubMed Two-hybrid 
    BioGRID:65778 BioGRID:68741 MED20    BioGRID  PubMed Two-hybrid 
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    General gene information

    Homology

    • Homologs of the CG14647 gene: The CG14647 gene is conserved in human, chimpanzee, , dog, mouse, rat, chicken, zebrafish, mosquito, A.thaliana, and rice.
    • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    voltage-gated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    potassium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    voltage-gated potassium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG14647 gene product from transcript CG14647-RB
    Names
    CG14647
    CG14647-PB
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      226212..227739
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141208.4 → NP_649465.6  CG14647 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      B9A0N7
      Related
      FBpp0288661, FBtr0290222
      Conserved Domains (3) summary
      pfam00805
      Location:284 – 322
      Blast Score: 124
      Pentapeptide; Pentapeptide repeats (8 copies)
      pfam13599
      Location:159 – 256
      Blast Score: 118
      Pentapeptide_4; Pentapeptide repeats (9 copies)
      cl02518
      Location:36 – 123
      Blast Score: 222
      BTB; BTB/POZ domain
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014297.2 AAF52131.5
    Protein Accession Links
    GenPept Link UniProtKB Link
    AAF52131.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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