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    CG7172 [ Drosophila melanogaster ]

    Gene ID: 40395, updated on 8-Jan-2012
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    Summary

    Official Symbol
    CG7172provided by Flybase
    Primary source
    FLYBASE:FBgn0037102
    Locus tag
    Dmel_CG7172
    Gene type
    protein coding
    RNA name
    CG7172
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0118547.316; Dmel\CG7172
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    Genomic context

    Location :
    78D6-78D6
    Sequence :
    Chromosome: 3L; NT_037436.3 (21561159..21562012, complement)
    See CG7172 in Epigenomics, MapViewer

    Chromosome 3L - NT_037436.3Genomic Context describing neighboring genes Neighboring gene capa receptor Neighboring gene CG7634 gene product from transcript CG7634-RA Neighboring gene CG32438 gene product from transcript CG32438-RE Neighboring gene CG32441 gene product from transcript CG32441-RD

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.
    5. Heterochromatic sequences in a Drosophila whole-genome shotgun assembly. Hoskins RA, et al. Genome Biol, 2002. PMID 12537574.

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:65639 BioGRID:59928 Bsg25D    BioGRID  PubMed Two-hybrid 
    BioGRID:65639 BioGRID:65588 CG10512    BioGRID  PubMed Two-hybrid 
    BioGRID:65639 BioGRID:59015 CG13001    BioGRID  PubMed Two-hybrid 
    BioGRID:65639 BioGRID:59727 CG17265    BioGRID  PubMed Two-hybrid 
    BioGRID:65639 BioGRID:64217 CG17744    BioGRID  PubMed Two-hybrid 
    BioGRID:65639 BioGRID:58346 CG3099    BioGRID  PubMed Two-hybrid 
    BioGRID:65639 BioGRID:67487 CG3353    BioGRID  PubMed Two-hybrid 
    BioGRID:65639 BioGRID:67998 CG5111    BioGRID  PubMed Two-hybrid 
    BioGRID:65639 BioGRID:66498 CG6719    BioGRID  PubMed Two-hybrid 
    BioGRID:65639 BioGRID:60332 CG9541    BioGRID  PubMed Two-hybrid 
    BioGRID:65639 BioGRID:63312 Or59a    BioGRID  PubMed Two-hybrid 
    BioGRID:65639 BioGRID:67455 Rlip    BioGRID  PubMed Two-hybrid 
    BioGRID:65639 BioGRID:60097 homer    BioGRID  PubMed Two-hybrid 
    BioGRID:65639 BioGRID:68333 stg    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG7172 gene product from transcript CG7172-RA
    Names
    CG7172
    CG7172-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.3

      Range
      21561159..21562012, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141076.4 → NP_649333.1  CG7172 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VP13
      Related
      FBpp0078032, FBtr0078377
      Conserved Domains (1) summary
      pfam10147
      Location:27 – 195
      Blast Score: 411
      CR6_interact; Growth arrest and DNA-damage-inducible proteins-interacting protein 1
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014296.4 AAF51748.1
    mRNA AY113645.1 AAM29650.1
    mRNA AY089565.1 AAL90303.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q9VP13.1 GenPept
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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