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AP3B1 adaptor-related protein complex 3, beta 1 subunit [ Canis lupus familiaris (dog) ]

Gene ID: 403459, updated on 19-Jan-2015
Gene symbol
AP3B1
Gene description
adaptor-related protein complex 3, beta 1 subunit
See related
Ensembl:ENSCAFG00000009207
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
See AP3B1 in MapViewer
Location:
chromosome: 3
Exon count:
29
Annotation release Status Assembly Chr Location
103 current CanFam3.1 (GCF_000002285.3) 3 NC_006585.3 (28481963..28748095)

Chromosome 3 - NC_006585.3Genomic Context describing neighboring genes Neighboring gene lipoma HMGIC fusion partner-like 2 Neighboring gene secretory carrier membrane protein 1 Neighboring gene ubiquitin-conjugating enzyme E2 N-like Neighboring gene tubulin folding cofactor A

Genomic Sequence:
NC_006585.3 chromosome 3 reference CanFam3.1 Primary Assembly

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Lysosome, organism-specific biosystem (from KEGG)
    Lysosome, organism-specific biosystemLysosomes are membrane-delimited organelles in animal cells serving as the cell's main digestive compartment to which all sorts of macromolecules are delivered for degradation. They contain more than...
  • Lysosome, conserved biosystem (from KEGG)
    Lysosome, conserved biosystemLysosomes are membrane-delimited organelles in animal cells serving as the cell's main digestive compartment to which all sorts of macromolecules are delivered for degradation. They contain more than...

Markers

Homology

Gene Ontology Provided by GO

Process Evidence Code Pubs
anterograde axon cargo transport ISS
Inferred from Sequence or Structural Similarity
more info
 
anterograde synaptic vesicle transport ISS
Inferred from Sequence or Structural Similarity
more info
 
intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
AP-3 adaptor complex IEA
Inferred from Electronic Annotation
more info
 
Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
clathrin-coated vesicle membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
AP-3 complex subunit beta-1
Names
AP-3 complex subunit beta-1
beta3A-adaptin
beta-3A-adaptin
adaptor protein complex AP-3 beta-1 subunit
adaptor protein complex AP-3 subunit beta-1
adapter-related protein complex 3 subunit beta-1
adaptor-related protein complex 3 subunit beta-1
adaptor-related protein complex AP3 beta 1 subunit
clathrin assembly protein complex 3 beta-1 large chain

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002974.2NP_001002974.1  AP-3 complex subunit beta-1

    See proteins identical to NP_001002974.1

    Status: PROVISIONAL

    Source sequence(s)
    AY221640
    UniProtKB/Swiss-Prot
    Q7YRF1
    Conserved Domains (3) summary
    pfam01602
    Location:46585
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:811955
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
    pfam14797
    Location:671757
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 103

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CanFam3.1 Primary Assembly

Genomic

  1. NC_006585.3 

    Range
    28481963..28748095
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005618024.1XP_005618081.1  

    UniProtKB/TrEMBL
    F1PVY2
    Related
    ENSCAFP00000013540, ENSCAFT00000014640
    Conserved Domains (3) summary
    pfam01602
    Location:46585
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:810954
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
    pfam14797
    Location:670756
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex
  2. XM_005618026.1XP_005618083.1  

    Conserved Domains (3) summary
    pfam01602
    Location:46585
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:811955
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
    pfam14797
    Location:671757
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex
  3. XM_005618025.1XP_005618082.1  

    Conserved Domains (3) summary
    pfam01602
    Location:46585
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:811955
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
    pfam14797
    Location:671757
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex