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    CG12975 [ Drosophila melanogaster ]

    Gene ID: 40343, updated on 9-May-2012
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    Summary

    Official Symbol
    CG12975provided by Flybase
    Primary source
    FLYBASE:FBgn0037061
    Locus tag
    Dmel_CG12975
    Gene type
    protein coding
    RNA name
    CG12975
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE57810; Dmel\CG12975
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    Genomic context

    Location :
    78C2-78C2
    Sequence :
    Chromosome: 3L; NT_037436.3 (21209095..21209924, complement)
    See CG12975 in Epigenomics, MapViewer

    Chromosome 3L - NT_037436.3Genomic Context describing neighboring genes Neighboring gene CG33056 gene product from transcript CG33056-RA Neighboring gene CG10512 gene product from transcript CG10512-RA Neighboring gene CG10510 gene product from transcript CG10510-RA Neighboring gene CG10508 gene product from transcript CG10508-RK Neighboring gene Integrin linked kinase Neighboring gene CG43219 gene product from transcript CG43219-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.

    See all (10) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:65592 BioGRID:67431 CG31199    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:65592 BioGRID:57914 HLH4C    BioGRID  PubMed Two-hybrid 
    BioGRID:65592 BioGRID:62960 MED8    BioGRID  PubMed Two-hybrid 
    BioGRID:65592 BioGRID:59107 dik    BioGRID  PubMed Two-hybrid 
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    General gene information

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
    		  
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    General protein information

    Preferred Names
    CG12975 gene product from transcript CG12975-RA
    Names
    CG12975
    CG12975-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.3

      Range
      21209095..21209924, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141036.3 → NP_649293.1  CG12975 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VP65
      Related
      FBpp0077965
      Conserved Domains (1) summary
      cl01066
      Location:91 – 113
      Blast Score: 94
      Trm112p; Trm112p-like protein
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014296.4 AAF51690.1
    mRNA AY071539.1 AAL49161.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VP65.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content