wbp11 WW domain binding protein 11 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: wbp11provided by ZNC
Official Full Name: WW domain binding protein 11provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-1829
See related: Ensembl:ENSDARG00000099151 AllianceGenome:ZFIN:ZDB-GENE-040426-1829
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:77390
Summary: Predicted to be involved in mRNA cis splicing, via spliceosome. Predicted to act upstream of or within RNA splicing; mRNA processing; and rRNA processing. Predicted to be located in cytoplasm and nucleus. Predicted to be part of spliceosomal complex. Orthologous to human WBP11 (WW domain binding protein 11). [provided by Alliance of Genome Resources, Apr 2022]
Annotation information: Annotation category: suggests misassembly; Annotation category: partial on reference assembly
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Genomic context

Location:: chromosome: Un

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	Unplaced Scaffold	NW_003334233.2 (1..8488)
105	previous assembly	GRCz10 (GCF_000002035.5)	Unplaced Scaffold	NW_003334233.2 (1..8488)

NW_003334233.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fj62b11.y1 (e-PCR)
- UniSTS:199688

G39881 (e-PCR)
- UniSTS:28819

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
acts_upstream_of_or_within RNA processing	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within RNA splicing	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within mRNA processing	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within rRNA processing	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: WW domain-binding protein 11

Names: WBP-11

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.