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    CG32226 [ Drosophila melanogaster ]

    Gene ID: 40229, updated on 9-May-2012
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    Summary

    Official Symbol
    CG32226provided by Flybase
    Primary source
    FLYBASE:FBgn0052226
    Locus tag
    Dmel_CG32226
    Gene type
    protein coding
    RNA name
    CG32226
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG18565; CG6468; Dmel\CG32226
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    Genomic context

    Location :
    77B1-77B2
    Sequence :
    Chromosome: 3L; NT_037436.3 (20290229..20295202, complement)
    See CG32226 in Epigenomics, MapViewer

    Chromosome 3L - NT_037436.3Genomic Context describing neighboring genes Neighboring gene golden goal Neighboring gene CG17122 gene product from transcript CG17122-RA Neighboring gene CG6480 gene product from transcript CG6480-RA Neighboring gene CG6597 gene product from transcript CG6597-RC Neighboring gene CG32225 gene product from transcript CG32225-RA Neighboring gene CG12306 gene product from transcript CG12306-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.
    5. Heterochromatic sequences in a Drosophila whole-genome shotgun assembly. Hoskins RA, et al. Genome Biol, 2002. PMID 12537574.

    See all (11) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:65492 BioGRID:59096 CG12985    BioGRID  PubMed Two-hybrid 
    BioGRID:65492 BioGRID:58851 CG15646    BioGRID  PubMed Two-hybrid 
    BioGRID:65492 BioGRID:61999 CG42336    BioGRID  PubMed Two-hybrid 
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    General gene information

    Homology

    • Homologs of the CG32226 gene: The CG32226 gene is conserved in human, chimpanzee, , dog, cow, mouse, rat, chicken, zebrafish, and mosquito.

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    sugar binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    integral to membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG32226 gene product from transcript CG32226-RA
    Names
    CG32226
    CG32226-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.3

      Range
      20290229..20295202, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_168841.1 → NP_730508.1  CG32226 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VWB0
      Related
      FBpp0074615, FBtr0074846
      Conserved Domains (5) summary
      cd00070
      Location:815 – 952
      Blast Score: 269
      GLECT; Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may ...
      smart00693
      Location:64 – 125
      Blast Score: 130
      DysFN; Dysferlin domain, N-terminal region.
      smart00694
      Location:1092 – 1113
      Blast Score: 95
      DysFC; Dysferlin domain, C-terminal region.
      smart00706
      Location:966 – 1000
      Blast Score: 100
      TECPR; Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins.
      pfam06462
      Location:1207 – 1238
      Blast Score: 127
      Hyd_WA; Propeller
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014296.4 AAF49038.2
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VWB0.2 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content