Sign in to NCBI

Display Settings:

Format

Send to:

Choose Destination
We are sorry, but NCBI web applications do not support your browser and may not function properly. More information

    prfB peptide chain release factor 2 [ Rickettsia bellii RML369-C ]

    Gene ID: 3995606, updated on 18-May-2013
    Gene symbol
    prfB
    Gene description
    peptide chain release factor 2
    Locus tag
    RBE_0598
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rickettsia bellii RML369-C (strain: RML369-C)
    Lineage
    Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group
    Sequence :
    NC_007940.1 (659516..660623, complement)

    NC_007940.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene GTP-binding protein LepA Neighboring gene GTP-binding protein LepA Neighboring gene ankyrin repeat-containing protein

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens. Ogata H, et al. PLoS Genet, 2006 May. PMID 16703114.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    peptide chain release factor 2
    YP_537768.1
    • recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007940.1

      Range
      659516..660623, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_537768.1 peptide chain release factor 2 [Rickettsia bellii RML369-C]

      Status: VALIDATED

      UniProtKB/Swiss-Prot
      Q1RIY5
      Conserved Domains (3) summary
      pfam00472
      Location:223 – 336
      Blast Score: 404
      RF-1; RF-1 domain
      pfam03462
      Location:93 – 193
      Blast Score: 349
      PCRF; PCRF domain
      PRK00578
      Location:1 – 367
      Blast Score: 1515
      prfB; peptide chain release factor 2; Validated
    Nucleotide Protein
    Heading Accession and Version
    genomic CP000087.1 ABE04679.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1RIY5.1 GenPept

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

      Related sites

      Feedback

      Subscription

      Recent activity

      Clear Turn Off Turn On

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...