These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_001015002.1 → NP_001015002.1 lethal(2) giant larvae protein homolog 2 isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 3' UTR and coding region compared to variant 3. The resulting isoform (b) is shorter and has a distinct C-terminus compared to isoform c.
- Source sequence(s)
-
AC100787, BC006503
- Consensus CDS
-
CCDS45776.1
- UniProtKB/Swiss-Prot
-
Q6P1M3
- Related
- ENSP00000364375, ENST00000375227
- Conserved Domains (2) summary
-
- pfam08366
Location:268 – 345
Blast Score: 341
- LLGL; LLGL2
- cl02567
Location:30 – 262
Blast Score: 108
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001031803.1 → NP_001026973.1 lethal(2) giant larvae protein homolog 2 isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) represents the longest transcript and encodes the longest isoform (c).
- Source sequence(s)
-
AC100787, BC031842, BC064994, X87342
- Consensus CDS
-
CCDS32733.1
- UniProtKB/TrEMBL
-
A0PJJ0
- UniProtKB/Swiss-Prot
-
Q6P1M3
- Related
- ENSP00000376333, ENST00000392550
- Conserved Domains (2) summary
-
- pfam08366
Location:268 – 372
Blast Score: 403
- LLGL; LLGL2
- cl02567
Location:30 – 262
Blast Score: 109
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_004524.2 → NP_004515.2 lethal(2) giant larvae protein homolog 2 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) lacks an alternate exon in the coding region compared to variant 3, that causes a frameshift. The resulting isoform (a) is shorter and has a distinct C-terminus compared to isoform c.
- Source sequence(s)
-
AC100787, BC031842, X87342
- Consensus CDS
-
CCDS11725.1
- UniProtKB/TrEMBL
-
A0PJJ0
- UniProtKB/Swiss-Prot
-
Q6P1M3
- Related
- ENSP00000167462, ENST00000167462
- Conserved Domains (2) summary
-
- pfam08366
Location:268 – 372
Blast Score: 402
- LLGL; LLGL2
- cl02567
Location:30 – 262
Blast Score: 109
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000017.10 Reference GRCh37.p5 Primary Assembly
- Range
- 73521783..73571290
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000149.1 Alternate HuRef
- Range
- 68945338..68995200
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)