U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

tk2.S thymidine kinase 2, mitochondrial S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 398276, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
tk2.S
Official Full Name
thymidine kinase 2, mitochondrial S homeolog
Primary source
Xenbase:XB-GENE-983645
Locus tag
XELAEV_18024842mg
See related
EnsemblRapid:ENSXLAG00005014167
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tk2
Annotation information
Annotation category: partial on reference assembly
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4S
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (39757542..39773784, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (38687379..38703632, complement)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene brain expressed associated with NEDD4 1 S homeolog Neighboring gene uncharacterized XB5732280 S homeolog Neighboring gene CKLF-like MARVEL transmembrane domain containing 3 S homeolog Neighboring gene CKLF-like MARVEL transmembrane domain containing 4 S homeolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables deoxynucleoside kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
thymidine kinase 2, mitochondrial S homeolog
Names
putative deoxyribonucleoside kinase
NP_001082184.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001088715.1 → NP_001082184.1  thymidine kinase 2, mitochondrial S homeolog

    See identical proteins and their annotated locations for NP_001082184.1

    Status: PROVISIONAL

    Source sequence(s)
    AF250861
    UniProtKB/TrEMBL
    A0A974CYG5, B1H1X0, Q8UVZ9
    Related
    ENSXLAP00005041683.1, ENSXLAT00005042677.1
    Conserved Domains (1) summary
    cd01673
    Location:72 → 258
    dNK; Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to yield corresponding monophosphates (dNMPs). This family consists of various deoxynucleoside kinases including deoxyribo- cytidine (EC 2.7.1.74), guanosine (EC 2.7.1. ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    39757542..39773784 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Miscellaneous