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slc31a2.S solute carrier family 31 member 2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 397694, updated on 11-Apr-2024

Summary

Official Symbol
slc31a2.S
Official Full Name
solute carrier family 31 member 2 S homeolog
Primary source
Xenbase:XB-GENE-6252852
Locus tag
XELAEV_18041770mg
See related
EnsemblRapid:ENSXLAG00005015970
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ctr2; xem1; copt2; slc31a2
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Genomic context

See slc31a2.S in Genome Data Viewer
Location:
chromosome: 8S
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8S NC_054386.1 (37868685..37872645)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8S NC_030739.1 (37399709..37403647)

Chromosome 8S - NC_054386.1Genomic Context describing neighboring genes Neighboring gene AT-hook transcription factor S homeolog Neighboring gene syntaxin binding protein 1 S homeolog Neighboring gene niban apoptosis regulator 2 S homeolog Neighboring gene uncharacterized LOC108700003 Neighboring gene emerin S homeolog Neighboring gene uncharacterized protein MGC75872 S homeolog

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables copper ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within copper ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within copper ion transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
solute carrier family 31 member 2 S homeolog
Names
solute carrier family 31 (copper transporter), member 2 S homeolog
solute carrier family 31 (copper transporters), member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001087704.1NP_001081173.1  solute carrier family 31 member 2 S homeolog

    See identical proteins and their annotated locations for NP_001081173.1

    Status: PROVISIONAL

    Source sequence(s)
    AB000458
    UniProtKB/TrEMBL
    A0A974C2R6, B7ZQG9, O42093
    Related
    ENSXLAP00005047022.1, ENSXLAT00005048126.1
    Conserved Domains (1) summary
    pfam04145
    Location:111158
    Ctr; Ctr copper transporter family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054386.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    37868685..37872645
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)