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    CG13074 [ Drosophila melanogaster ]

    Gene ID: 39760, updated on 10-May-2012
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    Summary

    Official Symbol
    CG13074provided by Flybase
    Primary source
    FLYBASE:FBgn0036567
    Locus tag
    Dmel_CG13074
    Gene type
    protein coding
    RNA name
    CG13074
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13074
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    Genomic context

    Location :
    72D5-72D5
    Sequence :
    Chromosome: 3L; NT_037436.3 (16088868..16090593, complement)
    See CG13074 in Epigenomics, MapViewer

    Chromosome 3L - NT_037436.3Genomic Context describing neighboring genes Neighboring gene Taspase 1 Neighboring gene CG5235 gene product from transcript CG5235-RA Neighboring gene Chloride channel-c Neighboring gene CG5389 gene product from transcript CG5389-RA Neighboring gene CG5414 gene product from transcript CG5414-RB Neighboring gene Integrator 9

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Molecular genetic analyses of polytene chromosome region 72A-D in Drosophila melanogaster reveal a gene desert in 72D. Cooper MT, et al. PLoS One, 2011. PMID 21853143.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:65069 BioGRID:59568 Cdlc2    BioGRID  PubMed Two-hybrid 
    BioGRID:65069 BioGRID:61596 Gapdh1    BioGRID  PubMed Two-hybrid 
    BioGRID:65069 BioGRID:59185 Pvf1    BioGRID  PubMed Two-hybrid 
    BioGRID:65069 BioGRID:78043 RpL15    BioGRID  PubMed Two-hybrid 
    BioGRID:65069 BioGRID:63563 RpL19    BioGRID  PubMed Two-hybrid 
    BioGRID:65069 BioGRID:75542 RpL41    BioGRID  PubMed Two-hybrid 
    BioGRID:65069 BioGRID:57920 ctp    BioGRID  PubMed Two-hybrid 
    BioGRID:65069 BioGRID:62657 robl    BioGRID  PubMed Two-hybrid 
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    General protein information

    Preferred Names
    CG13074 gene product from transcript CG13074-RA
    Names
    CG13074
    CG13074-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.3

      Range
      16088868..16090593, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140578.2 → NP_648835.1  CG13074 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VUY2
      Related
      FBpp0075251, FBtr0075496
      Conserved Domains (1) summary
      cl02567
      Location:190 – 438
      Blast Score: 100
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014296.4 AAF49541.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VUY2.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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