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AMY2 amylase, alpha 2B (pancreatic) [ Sus scrofa (pig) ]

Gene ID: 397397, updated on 4-Jul-2015
Gene symbol
AMY2
Gene description
amylase, alpha 2B (pancreatic)
See related
Ensembl:ENSSSCG00000023098
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
Also known as
AMY2B
See AMY2 in MapViewer
Location:
4; 4
Exon count:
14
Annotation release Status Assembly Chr Location
104 current Sscrofa10.2 (GCF_000003025.5) 4 NC_010446.4 (126301597..126321854)

Chromosome 4 - NC_010446.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102163001 Neighboring gene pancreatic alpha-amylase-like Neighboring gene pancreatic alpha-amylase-like Neighboring gene pancreatic alpha-amylase-like

Genomic Sequence:
NC_010446.4 chromosome 4 reference Sscrofa10.2 Primary Assembly

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Gene Ontology Provided by GO

Function Evidence Code Pubs
alpha-amylase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
calcium ion binding ISS
Inferred from Sequence or Structural Similarity
more info
 
chloride ion binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
carbohydrate catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
extracellular space ISS
Inferred from Sequence or Structural Similarity
more info
 
Preferred Names
pancreatic alpha-amylase
Names
1,4-alpha-D-glucan glucanohydrolase
PA
alpha-amylase
NP_999360.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_214195.1NP_999360.1  pancreatic alpha-amylase precursor

    See identical proteins and their annotated locations for NP_999360.1

    Status: PROVISIONAL

    Source sequence(s)
    AF064742
    UniProtKB/Swiss-Prot
    P00690
    Related
    ENSSSCP00000007308, ENSSSCT00000007507
    Conserved Domains (3) summary
    cd11317
    Location:25416
    AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    smart00632
    Location:422510
    Aamy_C; Aamy_C domain
    COG0366
    Location:51315
    AmyA; Glycosidase [Carbohydrate transport and metabolism]

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa10.2 Primary Assembly

Genomic

  1. NC_010446.4 Reference Sscrofa10.2 Primary Assembly

    Range
    126301597..126321854
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005663624.1XP_005663681.1  

    See identical proteins and their annotated locations for XP_005663681.1

    UniProtKB/TrEMBL
    F1S574
    Conserved Domains (3) summary
    cd11317
    Location:25416
    AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    smart00632
    Location:422510
    Aamy_C; Aamy_C domain
    COG0366
    Location:51315
    AmyA; Glycosidase [Carbohydrate transport and metabolism]
  2. XM_005663621.1XP_005663678.1  

    See identical proteins and their annotated locations for XP_005663678.1

    UniProtKB/TrEMBL
    F1S574
    Conserved Domains (3) summary
    cd11317
    Location:25416
    AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    smart00632
    Location:422510
    Aamy_C; Aamy_C domain
    COG0366
    Location:51315
    AmyA; Glycosidase [Carbohydrate transport and metabolism]
  3. XM_005663623.1XP_005663680.1  

    See identical proteins and their annotated locations for XP_005663680.1

    UniProtKB/TrEMBL
    F1S574
    Conserved Domains (3) summary
    cd11317
    Location:25416
    AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    smart00632
    Location:422510
    Aamy_C; Aamy_C domain
    COG0366
    Location:51315
    AmyA; Glycosidase [Carbohydrate transport and metabolism]
  4. XM_005663622.1XP_005663679.1  

    See identical proteins and their annotated locations for XP_005663679.1

    UniProtKB/TrEMBL
    F1S574
    Conserved Domains (3) summary
    cd11317
    Location:25416
    AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    smart00632
    Location:422510
    Aamy_C; Aamy_C domain
    COG0366
    Location:51315
    AmyA; Glycosidase [Carbohydrate transport and metabolism]