RPC_1693 hypothetical protein [Rhodopseudomonas palustris BisB18] - Gene

Summary

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Gene symbol: RPC_1693
Gene description: hypothetical protein
Locus tag: RPC_1693
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rhodopseudomonas palustris BisB18 (strain: BisB18)
Lineage: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas

Genomic context

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Sequence :: NC_007925.1 (1831357..1832982, complement)

NC_007925.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence

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Bibliography

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GeneRIFs: Gene References Into Functions What's a GeneRIF?

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Pathways from BioSystems

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2-Oxocarboxylic acid metabolism, organism-specific biosystem (from KEGG)
2-Oxocarboxylic acid metabolism, organism-specific biosystem2-Oxocarboxylic acids are the most elementary set of metabolites that includes pyruvate (2-oxopropanoate), 2-oxobutanoate, oxaloacetate (2-oxobutanedioate) and 2-oxoglutarate. This diagram illustrate...
2-Oxocarboxylic acid metabolism, conserved biosystem (from KEGG)
2-Oxocarboxylic acid metabolism, conserved biosystem2-Oxocarboxylic acids are the most elementary set of metabolites that includes pyruvate (2-oxopropanoate), 2-oxobutanoate, oxaloacetate (2-oxobutanedioate) and 2-oxoglutarate. This diagram illustrate...
Biosynthesis of amino acids, organism-specific biosystem (from KEGG)
Biosynthesis of amino acids, organism-specific biosystem
Biosynthesis of amino acids
Biosynthesis of amino acids, conserved biosystem (from KEGG)
Biosynthesis of amino acids, conserved biosystem
Biosynthesis of amino acids
Biosynthesis of secondary metabolites, organism-specific biosystem (from KEGG)
Biosynthesis of secondary metabolites, organism-specific biosystem
Biosynthesis of secondary metabolites
Butanoate metabolism, organism-specific biosystem (from KEGG)
Butanoate metabolism, organism-specific biosystem
Butanoate metabolism
Butanoate metabolism, conserved biosystem (from KEGG)
Butanoate metabolism, conserved biosystem
Butanoate metabolism
C5-Branched dibasic acid metabolism, organism-specific biosystem (from KEGG)
C5-Branched dibasic acid metabolism, organism-specific biosystem
C5-Branched dibasic acid metabolism
C5-Branched dibasic acid metabolism, conserved biosystem (from KEGG)
C5-Branched dibasic acid metabolism, conserved biosystem
C5-Branched dibasic acid metabolism
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine, organism-specific biosystem (from KEGG)
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine, organism-specific biosystemPathway module; Nucleotide and amino acid metabolism; Branched-chain amino acid metabolism
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine, conserved biosystem (from KEGG)
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine, conserved biosystemPathway module; Nucleotide and amino acid metabolism; Branched-chain amino acid metabolism
Pantothenate and CoA biosynthesis, organism-specific biosystem (from KEGG)
Pantothenate and CoA biosynthesis, organism-specific biosystem
Pantothenate and CoA biosynthesis
Pantothenate and CoA biosynthesis, conserved biosystem (from KEGG)
Pantothenate and CoA biosynthesis, conserved biosystem
Pantothenate and CoA biosynthesis
Valine, leucine and isoleucine biosynthesis, organism-specific biosystem (from KEGG)
Valine, leucine and isoleucine biosynthesis, organism-specific biosystem
Valine, leucine and isoleucine biosynthesis
Valine, leucine and isoleucine biosynthesis, conserved biosystem (from KEGG)
Valine, leucine and isoleucine biosynthesis, conserved biosystem
Valine, leucine and isoleucine biosynthesis
Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine, organism-specific biosystem (from KEGG)
Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine, organism-specific biosystemPathway module; Nucleotide and amino acid metabolism; Branched-chain amino acid metabolism
Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine, conserved biosystem (from KEGG)
Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine, conserved biosystemPathway module; Nucleotide and amino acid metabolism; Branched-chain amino acid metabolism

General gene information

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General protein information

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Names: hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_007925.1

Range

1831357..1832982, complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

YP_531571.1 hypothetical protein RPC_1693 [Rhodopseudomonas palustris BisB18]

Status: PROVISIONAL

UniProtKB/TrEMBL

Q218D4

Conserved Domains (4) summary

cd07035
Location:8 – 165
Blast Score: 385

TPP_PYR_POX_like; Pyrimidine (PYR) binding domain of POX and related proteins

PRK08266
Location:1 – 541
Blast Score: 2178

PRK08266; hypothetical protein; Provisional

pfam00205
Location:203 – 319
Blast Score: 155

TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

cl01629
Location:352 – 532
Blast Score: 483

TPP_enzymes; Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. These enzymes include, among others, the E1 components of the pyruvate, the acetoin and ...