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    CG13458 [ Drosophila melanogaster ]

    Gene ID: 39646, updated on 9-May-2012
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    Summary

    Official Symbol
    CG13458provided by Flybase
    Primary source
    FLYBASE:FBgn0036479
    Locus tag
    Dmel_CG13458
    Gene type
    protein coding
    RNA name
    CG13458
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13458
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    Genomic context

    Location :
    71B5-71B5
    Sequence :
    Chromosome: 3L; NT_037436.3 (15106657..15109473)
    See CG13458 in Epigenomics, MapViewer

    Chromosome 3L - NT_037436.3Genomic Context describing neighboring genes Neighboring gene Glycyl-tRNA synthetase Neighboring gene CTP synthase Neighboring gene CG17081 gene product from transcript CG17081-RB Neighboring gene CG16959 gene product from transcript CG16959-RB Neighboring gene CG32847 gene product from transcript CG32847-RB Neighboring gene CG13457 gene product from transcript CG13457-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Pirk is a negative regulator of the Drosophila Imd pathway. Kleino A, et al. J Immunol, 2008 Apr 15. PMID 18390723.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:64968 BioGRID:59928 Bsg25D    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:61615 CG11165    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:63151 CG11275    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:67930 CG11920    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:66250 CG11984    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:65075 CG12272    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:72625 CG12521    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:61207 CG13084    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:60404 CG13124    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:62077 CG13186    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:61571 CG1360    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:67866 CG13627    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:67069 CG14905    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:62860 CG15109    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:59859 CG15634    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:63794 CG15820    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:64518 CG16717    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:63827 CG16984    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:62243 CG17050    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:59639 CG17237    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:70890 CG17829    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:57748 CG3078    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:67898 CG31121    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:61185 CG31797    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:59807 CG31958    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:77449 CG32086    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:64754 CG32100    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:63022 CG3295    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:62530 CG33017    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:58619 CG4004    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:63034 CG4038    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:66450 CG4570    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:59556 CG4896    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:62713 CG5009    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:61044 CG5050    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:62572 CG5089    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:67577 CG5380    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:65502 CG5618    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:59176 CG6891    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:66687 CG7518    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:65631 CG7611    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:62023 CG7763    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:66213 CG8145    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:62344 CG8617    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:59010 CG9099    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:61621 CSN4    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:58247 Cp38    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:68612 Crk    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:68575 CstF-50    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:66871 CycC    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:59496 Gsc    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:57914 HLH4C    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:61349 Hr39    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:57980 Mlc-c    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:66320 P58IPK    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:61644 Pabp2    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:65045 Pka-C3    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:61920 RanBPM    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:63961 Rcd5    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:64525 SH3PX1    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:67060 Scp2    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:68066 Sld5    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:60255 Snx6    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:59325 Syx16    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:59861 Taf12L    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:58532 Tango10    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:69091 br    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:59332 cactin    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:57745 crn    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:68740 e(r)    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:61882 egr    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:63243 fd59A    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:68952 flw    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:61489 koi    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:58863 l(1)G0136    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:65286 mRpS26    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:61618 nito    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:63193 nsr    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:65820 opa    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:58172 p115    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:62415 pcs    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:71089 rin    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:62657 robl    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:61369 step    BioGRID  PubMed Two-hybrid 
    BioGRID:64968 BioGRID:57766 z    BioGRID  PubMed Two-hybrid 
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    General gene information

    mobile_element

    • Loc: 15107776-15107838 mobile_element_type = transposon:INE-1{}3328

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG13458 gene product from transcript CG13458-RA
    Names
    CG13458
    CG13458-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.3

      Range
      15106657..15109473
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140491.2 → NP_648748.1  CG13458 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VUL2
      Related
      FBpp0075390, FBtr0075637
      Conserved Domains (2) summary
      pfam01753
      Location:223 – 262
      Blast Score: 82
      zf-MYND; MYND finger
      pfam13824
      Location:222 – 276
      Blast Score: 198
      zf-Mss51; Zinc-finger of mitochondrial splicing suppressor 51
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014296.4 AAF49664.3
    mRNA AY051551.1 AAK92975.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VUL2.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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