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    CG3919 [ Drosophila melanogaster ]

    Gene ID: 39582, updated on 4-Feb-2012
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    Summary

    Official Symbol
    CG3919provided by Flybase
    Primary source
    FLYBASE:FBgn0036423
    Locus tag
    Dmel_CG3919
    Gene type
    protein coding
    RNA name
    CG3919
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG3919
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    Genomic context

    Location :
    70D7-70D7
    Sequence :
    Chromosome: 3L; NT_037436.3 (14403726..14405836)
    See CG3919 in Epigenomics, MapViewer

    Chromosome 3L - NT_037436.3Genomic Context describing neighboring genes Neighboring gene CG3868 gene product from transcript CG3868-RA Neighboring gene stonewall Neighboring gene big bang Neighboring gene CG9592 gene product from transcript CG9592-RB

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Stonewalling Drosophila stem cell differentiation by epigenetic controls. Maines JZ, et al. Development, 2007 Apr. PMID 17344229.
    4. Characterization of big bang, a novel gene encoding for PDZ domain-containing proteins that are dynamically expressed throughout Drosophila development. Kim SY, et al. Gene Expr Patterns, 2006 Jun. PMID 16423565.
    5. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:64915 BioGRID:62153 Ak6    BioGRID  PubMed Two-hybrid 
    BioGRID:64915 BioGRID:64167 CG10289    BioGRID  PubMed Two-hybrid 
    BioGRID:64915 BioGRID:60101 CG11322    BioGRID  PubMed Two-hybrid 
    BioGRID:64915 BioGRID:58346 CG3099    BioGRID  PubMed Two-hybrid 
    BioGRID:64915 BioGRID:66004 CG31482    BioGRID  PubMed Two-hybrid 
    BioGRID:64915 BioGRID:67487 CG3353    BioGRID  PubMed Two-hybrid 
    BioGRID:64915 BioGRID:64915 CG3919    BioGRID  PubMed Two-hybrid 
    BioGRID:64915 BioGRID:61540 Eaf    BioGRID  PubMed Two-hybrid 
    BioGRID:64915 BioGRID:59325 Syx16    BioGRID  PubMed Two-hybrid 
    BioGRID:64915 BioGRID:62905 hpo    BioGRID  PubMed Two-hybrid 
    BioGRID:64915 BioGRID:57898 rb    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG3919 gene product from transcript CG3919-RB
    Names
    CG3919
    CG3919-PB
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.3

      Range
      14403726..14405836
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140446.2 → NP_648703.4  CG3919 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KUK4
      Related
      FBpp0271747, FBtr0273239
      Conserved Domains (2) summary
      pfam02944
      Location:210 – 245
      Blast Score: 123
      BESS; BESS motif
      cl15779
      Location:20 – 100
      Blast Score: 207
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014296.4 AAF49740.3
    Protein Accession Links
    GenePept Link UniProtKB Link
    AAF49740.1 GenPept
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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