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    rpsT 30S ribosomal protein S20 [ Neorickettsia sennetsu str. Miyayama ]

    Gene ID: 3931463, updated on 26-Sep-2012
    Gene symbol
    rpsT
    Gene description
    30S ribosomal protein S20
    Locus tag
    NSE_0792
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Neorickettsia sennetsu str. Miyayama (strain: Miyayama, old-name: Neorickettsia sennetsu Miyayama)
    Lineage
    Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Neorickettsia
    Sequence :
    NC_007798.1 (703922..704185, complement)

    NC_007798.1Genomic Context describing neighboring genes Neighboring gene ferrochelatase Neighboring gene hypothetical protein Neighboring gene orotidine 5'-phosphate decarboxylase Neighboring gene TerC family membrane protein

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Comparative genomics of emerging human ehrlichiosis agents. Dunning Hotopp JC, et al. PLoS Genet, 2006 Feb. PMID 16482227.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    structural constituent of ribosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    ribosome assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    translation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Names
    30S ribosomal protein S20
    YP_506667.1
    • identified by similarity to SP:P02378; match to protein family HMM PF01649; match to protein family HMM TIGR00029

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007798.1

      Range
      703922..704185, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_506667.1 30S ribosomal protein S20 [Neorickettsia sennetsu str. Miyayama]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q2GCX9
      Conserved Domains (1) summary
      PRK00239
      Location:1 – 87
      Blast Score: 225
      rpsT; 30S ribosomal protein S20; Reviewed
    Nucleotide Protein
    Heading Accession and Version
    genomic CP000237.1 ABD45878.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2GCX9.1 GenPept

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

      Related sites

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