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    CG12362 [ Drosophila melanogaster ]

    Gene ID: 39193, updated on 10-May-2012
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    Summary

    Official Symbol
    CG12362provided by Flybase
    Primary source
    FLYBASE:FBgn0036082
    Locus tag
    Dmel_CG12362
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12362
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    Genomic context

    Location :
    67E2-67E3
    Sequence :
    Chromosome: 3L; NT_037436.3 (10405916..10407877)
    See CG12362 in Epigenomics, MapViewer

    Chromosome 3L - NT_037436.3Genomic Context describing neighboring genes Neighboring gene mir-276b stem loop Neighboring gene mir-276a stem loop Neighboring gene Ionotropic receptor 67b Neighboring gene Ionotropic receptor 67c

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Direct targets of the D. melanogaster DSXF protein and the evolution of sexual development. Luo SD, et al. Development, 2011 Jul. PMID 21652649.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:64574 BioGRID:62243 CG17050    BioGRID  PubMed Two-hybrid 
    BioGRID:64574 BioGRID:65445 CG8004    BioGRID  PubMed Two-hybrid 
    BioGRID:64574 BioGRID:72482 CycK    BioGRID  PubMed Two-hybrid 
    BioGRID:64574 BioGRID:70027 Pk17E    BioGRID  PubMed Two-hybrid 
    BioGRID:64574 BioGRID:62720 UbcD10    BioGRID  PubMed Two-hybrid 
    BioGRID:64574 BioGRID:62900 betaTub56D    BioGRID  PubMed Two-hybrid 
    BioGRID:64574 BioGRID:72787 krz    BioGRID  PubMed Two-hybrid 
    BioGRID:64574 BioGRID:68777 sol    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG12362 gene product from transcript CG12362-RB
    Names
    CG12362
    CG12362-PA
    CG12362-PB
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.3

      Range
      10405916..10407877
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_168405.1 → NP_729606.1  CG12362, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VT94
      Related
      FBpp0076010, FBtr0076281
      Conserved Domains (2) summary
      smart00647
      Location:208 – 269
      Blast Score: 180
      IBR; In Between Ring fingers
      pfam01485
      Location:208 – 269
      Blast Score: 162
      IBR; IBR domain

    2. NM_140135.1 → NP_648392.1  CG12362, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VT94
      Related
      FBpp0076011, FBtr0076282
      Conserved Domains (2) summary
      smart00647
      Location:208 – 269
      Blast Score: 180
      IBR; In Between Ring fingers
      pfam01485
      Location:208 – 269
      Blast Score: 162
      IBR; IBR domain
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014296.4 AAN11912.1
    genomic AE014296.4 AAF50159.1
    mRNA BT003638.1 AAO39642.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VT94.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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