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    CG3335 [ Drosophila melanogaster ]

    Gene ID: 39119, updated on 8-Jan-2012
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    Summary

    Official Symbol
    CG3335provided by Flybase
    Primary source
    FLYBASE:FBgn0036018
    Locus tag
    Dmel_CG3335
    Gene type
    protein coding
    RNA name
    CG3335
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    cg3335; Dm-RBD-1; Dmel\CG3335; Q9VT19
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    Genomic context

    Location :
    67C2-67C2
    Sequence :
    Chromosome: 3L; NT_037436.3 (9617383..9620425)
    See CG3335 in Epigenomics, MapViewer

    Chromosome 3L - NT_037436.3Genomic Context describing neighboring genes Neighboring gene CG3280 gene product from transcript CG3280-RB Neighboring gene Laminin B2 Neighboring gene Odorant receptor 67b Neighboring gene CG8336 gene product from transcript CG8336-RB Neighboring gene furry Neighboring gene CG8329 gene product from transcript CG8329-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Modulated modularity clustering as an exploratory tool for functional genomic inference. Stone EA, et al. PLoS Genet, 2009 May. PMID 19424432.
    2. Systems genetics of complex traits in Drosophila melanogaster. Ayroles JF, et al. Nat Genet, 2009 Mar. PMID 19234471.
    3. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    4. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    5. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:64510 BioGRID:61887 14-3-3zeta    BioGRID  PubMed Two-hybrid 
    BioGRID:64510 BioGRID:64445 Argk    BioGRID  PubMed Two-hybrid 
    BioGRID:64510 BioGRID:65143 CG4229    BioGRID  PubMed Two-hybrid 
    BioGRID:64510 BioGRID:63886 Hsp83    BioGRID  PubMed Two-hybrid 
    BioGRID:64510 BioGRID:69595 RpL12    BioGRID  PubMed Two-hybrid 
    BioGRID:64510 BioGRID:63893 RpL28    BioGRID  PubMed Two-hybrid 
    BioGRID:64510 BioGRID:62099 RpS11    BioGRID  PubMed Two-hybrid 
    BioGRID:64510 BioGRID:68606 RpS3A    BioGRID  PubMed Two-hybrid 
    BioGRID:64510 BioGRID:59621 aop    BioGRID  PubMed Two-hybrid 
    BioGRID:64510 BioGRID:65886 exba    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    helicase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    mRNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG3335 gene product from transcript CG3335-RA
    Names
    CG3335
    CG3335-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.3

      Range
      9617383..9620425
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140080.1 → NP_648337.1  CG3335 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VT19
      Related
      FBpp0076112, FBtr0076383
      Conserved Domains (1) summary
      cd00590
      Location:365 – 437
      Blast Score: 196
      RRM; RRM (RNA recognition motif), also known as RBD (RNA binding domain) or RNP (ribonucleoprotein domain), is a highly abundant domain in eukaryotes found in proteins involved in post-transcriptional gene expression processes including mRNA and rRNA ...
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014296.4 AAF50237.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q9VT19.1 GenPept
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content