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    RHOC ras homolog family member C [ Homo sapiens ]

    Gene ID: 389, updated on 12-May-2012

    Summary

    Official Symbol
    RHOCprovided by HGNC
    Official Full Name
    ras homolog family member Cprovided by HGNC
    Primary source
    HGNC:669
    Locus tag
    RP11-426L16.4
    See related
    Ensembl:ENSG00000155366; HPRD:01322; MIM:165380; Vega:OTTHUMG00000011905
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    H9; ARH9; ARHC; RHOH9; MGC1448; MGC61427
    Summary
    This gene encodes a member of the Rho family of small GTPases, which cycle between inactive GDP-bound and active GTP-bound states and function as molecular switches in signal transduction cascades. Rho proteins promote reorganization of the actin cytoskeleton and regulate cell shape, attachment, and motility. The protein encoded by this gene is prenylated at its C-terminus, and localizes to the cytoplasm and plasma membrane. It is thought to be important in cell locomotion. Overexpression of this gene is associated with tumor cell proliferation and metastasis. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Jul 2008]

    Genomic context

    Location :
    1p13.1
    Sequence :
    Chromosome: 1; NC_000001.10 (113243749..113250025, complement)
    See RHOC in Epigenomics, MapViewer

    Chromosome 1 - NC_000001.10Genomic Context describing neighboring genes Neighboring gene capping protein (actin filament) muscle Z-line, alpha 1 Neighboring gene RNA, U7 small nuclear 70 pseudogene Neighboring gene Mov10, Moloney leukemia virus 10, homolog (mouse) Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent, 1J Neighboring gene family with sequence similarity 19 (chemokine (C-C motif)-like), member A3

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    P08134 Q07960 ARHGAP1    HPRD  PubMed  
    P08134 O14578 CIT    HPRD  PubMed  
    P08134 O60610 DIAPH1    HPRD  PubMed  
    P08134 Q13464 ROCK1    HPRD  PubMed  
    P08134 Q9BST9 RTKN    HPRD  PubMed  
    BioGRID:106882 BioGRID:106885 ARHGAP1    BioGRID  PubMed Two-hybrid 
    BioGRID:106882 BioGRID:106889 ARHGDIA    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:106882 BioGRID:107305 CAV1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:106882 BioGRID:116290 CIT    BioGRID  PubMed Two-hybrid 
    BioGRID:106882 BioGRID:124219 LNX1    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:106882 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:106882 BioGRID:113269 VHL    BioGRID  PubMed Affinity Capture-MS 

    General gene information

    Markers

    Potential readthrough

    Included gene: PPM1J

    Homology

    Pathways from BioSystems

    • Axon guidance, organism-specific biosystem (from REACTOME)
      Axon guidance, organism-specific biosystemAxon guidance / axon pathfinding is the process by which neurons send out axons to reach the correct targets. Growing axons have a highly motile structure at the growing tip called the growth cone, w...
    • Developmental Biology, organism-specific biosystem (from REACTOME)
      Developmental Biology, organism-specific biosystemAs a first step towards capturing the array of processes by which a fertilized egg gives rise to the diverse tissues of the body, examples of three kinds of processes have been annotated. These are a...
    • G alpha (12/13) signalling events, organism-specific biosystem (from REACTOME)
      G alpha (12/13) signalling events, organism-specific biosystemThe G12/13 family is probably the least well characterized subtype, partly because G12/13 coupling is difficult to determine when compared with the other subtypes which predominantly rely on assay te...
    • GPCR downstream signaling, organism-specific biosystem (from REACTOME)
      GPCR downstream signaling, organism-specific biosystemG protein-coupled receptors (GPCRs) are classically defined as the receptor, G-protein and downstream effectors, the alpha subunit of the G-protein being the primary signaling molecule. However, it h...
    • Rho GTPase cycle, organism-specific biosystem (from REACTOME)
      Rho GTPase cycle, organism-specific biosystemThe cycling of Rho GTPases is tightly controlled by three classes of protein. These are (1) guanine nucleotide dissociation inhibitors or GDIs, which maintain Rho proteins in an inactive state in the...
    • Sema4D in semaphorin signaling, organism-specific biosystem (from REACTOME)
      Sema4D in semaphorin signaling, organism-specific biosystemSemaphorin 4D (Sema 4D/CD100) is an axon guidance molecule with two disulfide-linked 150-kDa subunits. SEMA4D is structurally defined by a conserved 500-amino acid extracellular domain with 16 cyste...
    • Sema4D induced cell migration and growth-cone collapse, organism-specific biosystem (from REACTOME)
      Sema4D induced cell migration and growth-cone collapse, organism-specific biosystemSema4D-mediated attraction of endothelial cells requires Rho, but not R-Ras, signaling. Sema4D-mediated plexinB1 activation activates Rho and its downstream effector ROCK. ROCK then phosphorylates ML...
    • Semaphorin interactions, organism-specific biosystem (from REACTOME)
      Semaphorin interactions, organism-specific biosystemSemaphorins are a large family of cell surface and secreted guidance molecules divided into eight classes on the basis of their structures. They all have an N-terminal conserved sema domain. Semaphor...
    • Signal Transduction, organism-specific biosystem (from REACTOME)
      Signal Transduction, organism-specific biosystemSignal transduction is a process in which extracellular signals elicit changes in cell state and activity. Transmembrane receptors sense changes in the cellular environment by binding ligands, such a...
    • Signaling by GPCR, organism-specific biosystem (from REACTOME)
      Signaling by GPCR, organism-specific biosystemG protein-coupled receptors (GPCRs; 7TM receptors; seven transmembrane domain receptors; heptahelical receptors; G protein-linked receptors [GPLR]) are the largest family of transmembrane receptors i...
    • Signaling by Rho GTPases, organism-specific biosystem (from REACTOME)
      Signaling by Rho GTPases, organism-specific biosystemThe Rho family of small guanine nucleotide binding proteins is one of five generally recognized branches of the Ras superfamily. Like most Ras superfamily members, typical Rho proteins function as bi...
    • Signaling events mediated by PRL, organism-specific biosystem (from Pathway Interaction Database)
      Signaling events mediated by PRL, organism-specific biosystem
      Signaling events mediated by PRL

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    GTPase activity TAS
    Traceable Author Statement
    more info
    PubMed 
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
     
    protein domain specific binding IEA
    Inferred from Electronic Annotation
    more info
     
    signal transducer activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Process Evidence Code Pubs
    GTP catabolic process TAS
    Traceable Author Statement
    more info
    PubMed 
    apical junction assembly IDA
    Inferred from Direct Assay
    more info
     
    axon guidance TAS
    Traceable Author Statement
    more info
     
    cell cycle cytokinesis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    negative regulation of I-kappaB kinase/NF-kappaB cascade IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of calcium ion transport via voltage-gated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of neuron differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    neuron projection morphogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of I-kappaB kinase/NF-kappaB cascade IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    positive regulation of actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of cell adhesion IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of cell growth IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of cysteine-type endopeptidase activity involved in apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of neuron apoptosis IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of translation IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of vasoconstriction IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of actin polymerization or depolymerization IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of dendrite development IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of small GTPase mediated signal transduction TAS
    Traceable Author Statement
    more info
     
    response to amino acid stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    response to drug IEA
    Inferred from Electronic Annotation
    more info
     
    response to ethanol IEA
    Inferred from Electronic Annotation
    more info
     
    response to glucocorticoid stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    response to glucose stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    response to hypoxia IEA
    Inferred from Electronic Annotation
    more info
     
    response to mechanical stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    signal transduction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    small GTPase mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    small GTPase mediated signal transduction TAS
    Traceable Author Statement
    more info
     
    stress-activated protein kinase signaling cascade IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    axon IEA
    Inferred from Electronic Annotation
    more info
     
    cleavage furrow IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytosol TAS
    Traceable Author Statement
    more info
     
    intracellular IEA
    Inferred from Electronic Annotation
    more info
     
    membrane fraction IEA
    Inferred from Electronic Annotation
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane TAS
    Traceable Author Statement
    more info
     
    soluble fraction IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    rho-related GTP-binding protein RhoC
    Names
    rho-related GTP-binding protein RhoC
    rhoC GTPase
    oncogene RHO H9
    rho cDNA clone 9
    RAS-related homolog 9
    small GTP binding protein RhoC
    ras homolog gene family, member C

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001042678.1NP_001036143.1  rho-related GTP-binding protein RhoC precursor

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) lacks an alternate exon in the 5' UTR compared to variant 1. Variants 1, 2, and 3 encode the same protein.
      Source sequence(s)
      BC052808, CB851337, CX872299
      Consensus CDS
      CCDS854.1
      UniProtKB/Swiss-Prot
      P08134
      Related
      ENSP00000358656, OTTHUMP00000013676, ENST00000369642, OTTHUMT00000032905
      Conserved Domains (1) summary
      cd01870
      Location:5179
      Blast Score: 991
      RhoA_like; Ras homology family A (RhoA)-like includes RhoA, RhoB and RhoC
    2. NM_001042679.1NP_001036144.1  rho-related GTP-binding protein RhoC precursor

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2, and 3 encode the same protein.
      Source sequence(s)
      BC009177, BQ231012, CB851337, CN289691
      Consensus CDS
      CCDS854.1
      UniProtKB/Swiss-Prot
      P08134
      Related
      ENSP00000358647, ENST00000369633
      Conserved Domains (1) summary
      cd01870
      Location:5179
      Blast Score: 991
      RhoA_like; Ras homology family A (RhoA)-like includes RhoA, RhoB and RhoC
    3. NM_175744.4NP_786886.1  rho-related GTP-binding protein RhoC precursor

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2, and 3 encode the same protein.
      Source sequence(s)
      BC009177, CB851337, CX872299
      Consensus CDS
      CCDS854.1
      UniProtKB/Swiss-Prot
      P08134
      Related
      ENSP00000345236, OTTHUMP00000013675, ENST00000339083, OTTHUMT00000032903
      Conserved Domains (1) summary
      cd01870
      Location:5179
      Blast Score: 991
      RhoA_like; Ras homology family A (RhoA)-like includes RhoA, RhoB and RhoC

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000001.10 Reference GRCh37.p5 Primary Assembly

      Range
      113243749..113250025, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000133.1 Alternate HuRef

      Range
      111102116..111108421, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

      Supplemental Content

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