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    CG8541 [ Drosophila melanogaster ]

    Gene ID: 38838, updated on 10-May-2012
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    Summary

    Official Symbol
    CG8541provided by Flybase
    Primary source
    FLYBASE:FBgn0035788
    Locus tag
    Dmel_CG8541
    Gene type
    protein coding
    RNA name
    CG8541
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG8541
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    Genomic context

    Location :
    66A2-66A2
    Sequence :
    Chromosome: 3L; NT_037436.3 (7464659..7465614)
    See CG8541 in Epigenomics, MapViewer

    Chromosome 3L - NT_037436.3Genomic Context describing neighboring genes Neighboring gene CG42661 gene product from transcript CG42661-RA Neighboring gene CG8543 gene product from transcript CG8543-RA Neighboring gene CG43292 gene product from transcript CG43292-RA Neighboring gene methuselah-like 6

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. A possible structural model of members of the CPF family of cuticular proteins implicating binding to components other than chitin. Papandreou NC, et al. J Insect Physiol, 2010 Oct. PMID 20417215.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. A Drosophila protein-interaction map centered on cell-cycle regulators. Stanyon CA, et al. Genome Biol, 2004. PMID 15575970.

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:64275 BioGRID:58656 CG12723    BioGRID  PubMed Two-hybrid 
    BioGRID:64275 BioGRID:59816 CG15422    BioGRID  PubMed Two-hybrid 
    BioGRID:64275 BioGRID:62020 CG9027    BioGRID  PubMed Two-hybrid 
    BioGRID:64275 BioGRID:533699 CR32205    BioGRID  PubMed Two-hybrid 
    BioGRID:64275 BioGRID:1455263 CR32207    BioGRID  PubMed Two-hybrid 
    BioGRID:64275 BioGRID:63769 Cpr62Bb    BioGRID  PubMed Two-hybrid 
    BioGRID:64275 BioGRID:62468 Zasp52    BioGRID  PubMed Two-hybrid 
    BioGRID:64275 BioGRID:67158 ald    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    structural constituent of chitin-based cuticle ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
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    General protein information

    Preferred Names
    CG8541 gene product from transcript CG8541-RA
    Names
    CG8541
    CG8541-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.3

      Range
      7464659..7465614
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139870.2 → NP_648127.1  CG8541 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VS76
      Related
      FBpp0076572
      Conserved Domains (1) summary
      pfam11018
      Location:31 – 138
      Blast Score: 133
      Cuticle_3; Pupal cuticle protein C1
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014296.4 AAF50552.1
    mRNA BT125096.1 ADL59614.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VS76.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content