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    CG10147 [ Drosophila melanogaster ]

    Gene ID: 38733, updated on 9-May-2012
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    Summary

    Official Symbol
    CG10147provided by Flybase
    Primary source
    FLYBASE:FBgn0035702
    Locus tag
    Dmel_CG10147
    Gene type
    protein coding
    RNA name
    CG10147
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG10147
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    Genomic context

    Location :
    65B3-65B3
    Sequence :
    Chromosome: 3L; NT_037436.3 (6479697..6481524, complement)
    See CG10147 in Epigenomics, MapViewer

    Chromosome 3L - NT_037436.3Genomic Context describing neighboring genes Neighboring gene CG13300 gene product from transcript CG13300-RA Neighboring gene Seminal fluid protein 65A Neighboring gene CG42747 gene product from transcript CG42747-RC Neighboring gene CG8270 gene product from transcript CG8270-RB Neighboring gene CG10144 gene product from transcript CG10144-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Rapid and efficient cDNA library screening by self-ligation of inverse PCR products (SLIP). Hoskins RA, et al. Nucleic Acids Res, 2005 Dec 2. PMID 16326860.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. Protein interaction mapping: a Drosophila case study. Formstecher E, et al. Genome Res, 2005 Mar. PMID 15710747.

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:64185 BioGRID:63393 CG3735    BioGRID  PubMed Two-hybrid 
    BioGRID:64185 BioGRID:67851 CG6607    BioGRID  PubMed Two-hybrid 
    BioGRID:64185 BioGRID:59980 CG8965    BioGRID  PubMed Two-hybrid 
    BioGRID:64185 BioGRID:62884 CG9975    BioGRID  PubMed Two-hybrid 
    BioGRID:64185 BioGRID:72482 CycK    BioGRID  PubMed Two-hybrid 
    BioGRID:64185 BioGRID:59275 Mer    BioGRID  PubMed Two-hybrid 
    BioGRID:64185 BioGRID:64408 Prm    BioGRID  PubMed Two-hybrid 
    BioGRID:64185 BioGRID:63994 ago    BioGRID  PubMed Two-hybrid 
    BioGRID:64185 BioGRID:61534 cos    BioGRID  PubMed Two-hybrid 
    BioGRID:64185 BioGRID:62282 fl(2)d    BioGRID  PubMed Two-hybrid 
    BioGRID:64185 BioGRID:68659 toy    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG10147 gene product from transcript CG10147-RA
    Names
    CG10147
    CG10147-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.3

      Range
      6479697..6481524, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139789.2 → NP_648046.1  CG10147 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VRX0
      Related
      FBpp0076696, FBtr0076987
      Conserved Domains (3) summary
      COG5189
      Location:228 – 281
      Blast Score: 96
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      pfam13465
      Location:395 – 418
      Blast Score: 75
      zf-H2C2_2; Zinc-finger double domain
      cl07874
      Location:7 – 80
      Blast Score: 143
      zf-AD; Zinc-finger associated domain (zf-AD)
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA BT022207.1 AAY51601.1
    genomic AE014296.4 AAF50662.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VRX0.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content