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    CG8219 [ Drosophila melanogaster ]

    Gene ID: 38722, updated on 10-May-2012
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    Summary

    Official Symbol
    CG8219provided by Flybase
    Primary source
    FLYBASE:FBgn0035693
    Locus tag
    Dmel_CG8219
    Gene type
    protein coding
    RNA name
    CG8219
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    148274_at; Dmel\CG8219; EP(3)3072
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    Genomic context

    Location :
    65A8-65A8
    Sequence :
    Chromosome: 3L; NT_037436.3 (6193573..6196876)
    See CG8219 in Epigenomics, MapViewer

    Chromosome 3L - NT_037436.3Genomic Context describing neighboring genes Neighboring gene CG13298 gene product from transcript CG13298-RA Neighboring gene Transportin Neighboring gene Laminin A Neighboring gene putative noncoding RNA 008:3L

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Expanded polyglutamine domain possesses nuclear export activity which modulates subcellular localization and toxicity of polyQ disease protein via exportin-1. Chan WM, et al. Hum Mol Genet, 2011 May 1. PMID 21300695.
    2. The nucleosome remodeling factor ISWI functionally interacts with an evolutionarily conserved network of cellular factors. Arancio W, et al. Genetics, 2010 May. PMID 20194965.
    3. Telomeric position effect--a third silencing mechanism in eukaryotes. Doheny JG, et al. PLoS One, 2008. PMID 19057646.
    4. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    5. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:64175 BioGRID:60149 CG13784    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:61657 CG14759    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:78236 CG17374    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:63206 CG2852    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:58032 CG5941    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:62509 CG8435    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:57786 Csat    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:58935 Cyp1    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:66904 Hsc70-4    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:58363 Idgf4    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:58924 Mfe2    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:68014 RpL27    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:61504 Tsp42Ef    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:65755 TwdlF    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:57861 VhaAC39-1    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:68312 dgt6    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:60000 eIF-4a    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:62894 hts    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:63343 l(2)efl    BioGRID  PubMed Two-hybrid 
    BioGRID:64175 BioGRID:69326 pnr    BioGRID  PubMed Phenotypic Enhancement 
    BioGRID:64175 BioGRID:66252 tgo    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    protein transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    protein import into nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    nuclear pore ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
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    General protein information

    Preferred Names
    CG8219 gene product from transcript CG8219-RA
    Names
    CG8219
    CG8219-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.3

      Range
      6193573..6196876
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139781.1 → NP_648038.1  CG8219 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VRV9
      Related
      FBpp0076711, FBtr0077003
      Conserved Domains (3) summary
      cd00020
      Location:104 – 214
      Blast Score: 111
      ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
      COG5215
      Location:21 – 751
      Blast Score: 279
      KAP95; Karyopherin (importin) beta [Intracellular trafficking and secretion]
      cl04271
      Location:19 – 76
      Blast Score: 102
      IBN_N; Importin-beta N-terminal domain
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014296.4 AAF50673.2
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VRV9.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content