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    Chd64 [ Drosophila melanogaster ]

    Gene ID: 38490, updated on 8-Jan-2012
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    Summary

    Official Symbol
    Chd64provided by Flybase
    Primary source
    FLYBASE:FBgn0035499
    Locus tag
    Dmel_CG14996
    Gene type
    protein coding
    RNA name
    Chd64
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-EST:Liang-1.80; CG-14996; CG14996; clone 1.80; CT34849; Dmel\CG14996
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    Genomic context

    Location :
    64A6-64A7
    Sequence :
    Chromosome: 3L; NT_037436.3 (4114289..4122423, complement)
    See Chd64 in Epigenomics, MapViewer

    Chromosome 3L - NT_037436.3Genomic Context describing neighboring genes Neighboring gene Fermitin 1 Neighboring gene CG14992 gene product from transcript CG14992-RA Neighboring gene ensconsin Neighboring gene Replication factor C subunit 4

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Bicaudal is a conserved substrate for Drosophila and mammalian caspases and is essential for cell survival. Creagh EM, et al. PLoS One, 2009. PMID 19330035.
    2. Drosophila ensconsin promotes productive recruitment of Kinesin-1 to microtubules. Sung HH, et al. Dev Cell, 2008 Dec. PMID 19081075.
    3. Quantitative genetic analysis of sleep in Drosophila melanogaster. Harbison ST, et al. Genetics, 2008 Apr. PMID 18430954.
    4. Identification and characterization of a juvenile hormone response element and its binding proteins. Li Y, et al. J Biol Chem, 2007 Dec 28. PMID 17956872.
    5. Isolation of microRNA targets by miRNP immunopurification. Easow G, et al. RNA, 2007 Aug. PMID 17592038.

    See all (23) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:63970 BioGRID:63895 CG11505    BioGRID  PubMed Two-hybrid 
    BioGRID:63970 BioGRID:57888 CG15572    BioGRID  PubMed Two-hybrid 
    BioGRID:63970 BioGRID:58147 CG1999    BioGRID  PubMed Two-hybrid 
    BioGRID:63970 BioGRID:58346 CG3099    BioGRID  PubMed Two-hybrid 
    BioGRID:63970 BioGRID:62543 CG4282    BioGRID  PubMed Two-hybrid 
    BioGRID:63970 BioGRID:60006 H2.0    BioGRID  PubMed Two-hybrid 
    BioGRID:63970 BioGRID:68671 a    BioGRID  PubMed Two-hybrid 
    BioGRID:63970 BioGRID:66585 dpr17    BioGRID  PubMed Two-hybrid 
    BioGRID:63970 BioGRID:67755 eIF4G2    BioGRID  PubMed Two-hybrid 
    BioGRID:63970 BioGRID:64769 eyg    BioGRID  PubMed Two-hybrid 
    BioGRID:63970 BioGRID:61489 koi    BioGRID  PubMed Two-hybrid 
    BioGRID:63970 BioGRID:62642 mbl    BioGRID  PubMed Two-hybrid 
    BioGRID:63970 BioGRID:68829 sns    BioGRID  PubMed Two-hybrid 
    BioGRID:63970 BioGRID:68777 sol    BioGRID  PubMed Two-hybrid 
    BioGRID:63970 BioGRID:76691 stg1    BioGRID  PubMed Two-hybrid 
    BioGRID:63970 BioGRID:57572 vnd    BioGRID  PubMed Two-hybrid 
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    General gene information

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    actin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    juvenile hormone response element binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    juvenile hormone mediated signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    smooth muscle contraction ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    striated muscle thin filament ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
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    General protein information

    Preferred Names
    CG14996 gene product from transcript CG14996-RB
    Names
    CG14996-PB
    Chd64
    Chd64-PB
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.3

      Range
      4114289..4122423, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139603.2 → NP_647860.1  Chd64 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VZI1
      Related
      FBpp0073126, FBtr0073270
      Conserved Domains (1) summary
      cd00014
      Location:32 – 133
      Blast Score: 227
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA AY060355.1 AAL25394.1
    genomic AE014296.4 AAF47840.2
    mRNA AF217286.1 AAF44064.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q9VZI1.1 GenPept
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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