My NCBISign In

Display Settings:

Format

Send to:

Choose Destination

    CG13806 [ Drosophila melanogaster ]

    Gene ID: 38292, updated on 4-Feb-2012
    Help top of page

    Summary

    Official Symbol
    CG13806provided by Flybase
    Primary source
    FLYBASE:FBgn0035325
    Locus tag
    Dmel_CG13806
    Gene type
    protein coding
    RNA name
    CG13806
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13806
    Help top of page

    Genomic context

    Location :
    62D4-62D4
    Sequence :
    Chromosome: 3L; NT_037436.3 (2266394..2267640)
    See CG13806 in Epigenomics, MapViewer

    Chromosome 3L - NT_037436.3Genomic Context describing neighboring genes Neighboring gene CG2034 gene product from transcript CG2034-RA Neighboring gene peptide O-xylosyltransferase Neighboring gene CG13807 gene product from transcript CG13807-RA Neighboring gene ecdysoneless Neighboring gene obstructor-I Neighboring gene CG32302 gene product from transcript CG32302-RA Neighboring gene CG5717 gene product from transcript CG5717-RA

    Help top of page

    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
    Helptop of page

    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. A Drosophila protein-interaction map centered on cell-cycle regulators. Stanyon CA, et al. Genome Biol, 2004. PMID 15575970.
    5. Cell-autonomous roles of the ecdysoneless gene in Drosophila development and oogenesis. Gaziova I, et al. Development, 2004 Jun. PMID 15128659.

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Help top of page

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:63807 BioGRID:67008 Akt1    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:66107 CG11286    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:57560 CG13373    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:61707 CG14744    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:58147 CG1999    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:61339 CG9248    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:62567 Cdk4    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:64701 CycA    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:68567 CycG    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:72482 CycK    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:61336 E2f2    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:58107 Nf-YC    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:65629 SAK    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:67158 ald    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:60206 cdc14    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:77538 dpr9    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:68673 nej    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:69325 plu    BioGRID  PubMed Two-hybrid 
    BioGRID:63807 BioGRID:61701 ptc    BioGRID  PubMed Two-hybrid 
    Help top of page

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    chitin metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  
    Help top of page

    General protein information

    Preferred Names
    CG13806 gene product from transcript CG13806-RA
    Names
    CG13806
    CG13806-PA
    Help top of page

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.3

      Range
      2266394..2267640
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139451.2 → NP_647708.1  CG13806 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SXL5
      Related
      FBpp0072758
      Conserved Domains (1) summary
      cl02629
      Location:250 – 293
      Blast Score: 106
      CBM_14; Chitin binding Peritrophin-A domain
    Help top of page

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA AY089572.1 AAL90310.1
    genomic AE014296.4 AAF47629.2
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q8SXL5.1 GenPept
    Help top of page

    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content