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    CG13907 [ Drosophila melanogaster ]

    Gene ID: 38104, updated on 9-May-2012
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    Summary

    Official Symbol
    CG13907provided by Flybase
    Primary source
    FLYBASE:FBgn0035173
    Locus tag
    Dmel_CG13907
    Gene type
    protein coding
    RNA name
    CG13907
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13907
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    Genomic context

    Location :
    61D2-61D3
    Sequence :
    Chromosome: 3L; NT_037436.3 (877281..881873, complement)
    See CG13907 in Epigenomics, MapViewer

    Chromosome 3L - NT_037436.3Genomic Context describing neighboring genes Neighboring gene CG12191 gene product from transcript CG12191-RA Neighboring gene CG12502 gene product from transcript CG12502-RB Neighboring gene CG32479 gene product from transcript CG32479-RA Neighboring gene ncRNA Neighboring gene ncRNA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.
    5. Heterochromatic sequences in a Drosophila whole-genome shotgun assembly. Hoskins RA, et al. Genome Biol, 2002. PMID 12537574.

    See all (9) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:63659 BioGRID:59520 CG13949    BioGRID  PubMed Two-hybrid 
    BioGRID:63659 BioGRID:64092 Msr-110    BioGRID  PubMed Two-hybrid 
    BioGRID:63659 BioGRID:68014 RpL27    BioGRID  PubMed Two-hybrid 
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    General gene information

    Homology

    • Homologs of the CG13907 gene: The CG13907 gene is conserved in human, chimpanzee, , dog, cow, mouse, rat, chicken, mosquito, and C.elegans.

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    secondary active monocarboxylate transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    integral to membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG13907 gene product from transcript CG13907-RA
    Names
    CG13907
    CG13907-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.3

      Range
      877281..881873, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_138225.2 → NP_612069.1  CG13907 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W0L6
      Related
      FBpp0072490, FBtr0072593
      Conserved Domains (1) summary
      cd06174
      Location:78 – 258
      Blast Score: 228
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA AY089513.1 AAL90251.1
    genomic AE014296.4 AAF47427.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W0L6.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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