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    CG42360 [ Drosophila melanogaster ]

    Gene ID: 37937, updated on 9-May-2012
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    Summary

    Official Symbol
    CG42360provided by Flybase
    Primary source
    FLYBASE:FBgn0259742
    Locus tag
    Dmel_CG42360
    Gene type
    protein coding
    RNA name
    CG42360
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG13588; CG3579; Dmel\CG42360
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    Genomic context

    Location :
    60D9-60D9
    Sequence :
    Chromosome: 2R; NT_033778.3 (20494812..20498049)
    See CG42360 in Epigenomics, MapViewer

    Chromosome 2R - NT_033778.3Genomic Context describing neighboring genes Neighboring gene CG3565 gene product from transcript CG3565-RA Neighboring gene CG3570 gene product from transcript CG3570-RA Neighboring gene CG4707 gene product from transcript CG4707-RA Neighboring gene CG42361 gene product from transcript CG42361-RA Neighboring gene CG4741 gene product from transcript CG4741-RB Neighboring gene CG3608 gene product from transcript CG3608-RA Neighboring gene CG13594 gene product from transcript CG13594-RA Neighboring gene ncRNA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. Protein interaction mapping: a Drosophila case study. Formstecher E, et al. Genome Res, 2005 Mar. PMID 15710747.
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:63509 BioGRID:60093 CG11327    BioGRID  PubMed Two-hybrid 
    BioGRID:63509 BioGRID:66908 Set    BioGRID  PubMed Two-hybrid 
    BioGRID:63509 BioGRID:77545 p53    BioGRID  PubMed Two-hybrid 
    BioGRID:63509 BioGRID:68433 spn-A    BioGRID  PubMed Two-hybrid 
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    General protein information

    Preferred Names
    CG42360 gene product from transcript CG42360-RA
    Names
    CG42360
    CG42360-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.3

      Range
      20494812..20498049
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_138102.3 → NP_611946.2  CG42360 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W135
      Related
      FBpp0289236
      Conserved Domains (1) summary
      pfam11977
      Location:341 – 492
      Blast Score: 502
      RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE013599.4 AAF47242.3
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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