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His2B:CG33870 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3772081, updated on 29-Dec-2023

Summary

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Official Symbol
His2B:CG33870provided by FlyBase
Primary source
FLYBASE:FBgn0053870
Locus tag
Dmel_CG33870
See related
AllianceGenome:FB:FBgn0053870
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG33870; Dmel\CG33870
Summary
Predicted to enable DNA binding activity. Predicted to be involved in chromatin assembly or disassembly. Predicted to be part of nucleosome. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
39E1-39E1; 2-54 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (21532461..21533055, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (21532461..21533055, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene histone H3 Neighboring gene histone H1 Neighboring gene histone H2A Neighboring gene small non-coding RNA 430s Neighboring gene histone H4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence of histone 2B of Drosophila melanogaster. Elgin SC, et al. Biochemistry, 1979 Dec 11. PMID 117830
  2. Acetylation by Tip60 is required for selective histone variant exchange at DNA lesions. Kusch T, et al. Science, 2004 Dec 17. PMID 15528408
  3. Histone H2A.Z is widely but nonrandomly distributed in chromosomes of Drosophila melanogaster. Leach TJ, et al. J Biol Chem, 2000 Jul 28. PMID 10801889
  4. The Release 6 reference sequence of the Drosophila melanogaster genome. Hoskins RA, et al. Genome Res, 2015 Mar. PMID 25589440, Free PMC Article
  5. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables DNA binding NAS
Non-traceable Author Statement
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
  
enables protein-containing complex binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in chromatin organization ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
  
part_of nucleosome NAS
Non-traceable Author Statement
more info
 PubMed 
part_of nucleosome TAS
Traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
histone H2B
Names
CG33870-PA
His2B:CG33870-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    21532461..21533055 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001032209.2 → NP_001027380.1  histone H2B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001027380.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P02283, Q4ABE1, Q9W5U7
    Conserved Domains (1) summary
    smart00427
    Location:33 → 121
    H2B; Histone H2B
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
6PWE_D.1
6PWE_H.1
6PWF_D.1
6PWF_H.1
P02283.2 P02283

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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