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    CG9875 [ Drosophila melanogaster ]

    Gene ID: 37698, updated on 9-May-2012
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    Summary

    Official Symbol
    CG9875provided by Flybase
    Primary source
    FLYBASE:FBgn0034850
    Locus tag
    Dmel_CG9875
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GH23338; Dmel\CG9875
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    Genomic context

    Location :
    59D8-59D8
    Sequence :
    Chromosome: 2R; NT_033778.3 (19245183..19246419)
    See CG9875 in Epigenomics, MapViewer

    Chromosome 2R - NT_033778.3Genomic Context describing neighboring genes Neighboring gene CG30409 gene product from transcript CG30409-RB Neighboring gene CG30410 gene product from transcript CG30410-RC Neighboring gene CG3500 gene product from transcript CG3500-RA Neighboring gene CG34423 gene product from transcript CG34423-RB Neighboring gene CG34424 gene product from transcript CG34424-RA Neighboring gene virilizer Neighboring gene CG13550 gene product from transcript CG13550-RA Neighboring gene CG3493 gene product from transcript CG3493-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.
    5. Heterochromatic sequences in a Drosophila whole-genome shotgun assembly. Hoskins RA, et al. Genome Biol, 2002. PMID 12537574.

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:63300 BioGRID:57550 CG12470    BioGRID  PubMed Two-hybrid 
    BioGRID:63300 BioGRID:72489 CG14476    BioGRID  PubMed Two-hybrid 
    BioGRID:63300 BioGRID:62969 CG18067    BioGRID  PubMed Two-hybrid 
    BioGRID:63300 BioGRID:57914 HLH4C    BioGRID  PubMed Two-hybrid 
    BioGRID:63300 BioGRID:58141 brk    BioGRID  PubMed Two-hybrid 
    BioGRID:63300 BioGRID:58261 oc    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    5-formyltetrahydrofolate cyclo-ligase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG9875 gene product from transcript CG9875-RA
    Names
    CG9875
    CG9875-PA
    CG9875-PB
    NP_001163262.1
    NP_611784.2
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.3

      Range
      19245183..19246419
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137940.3 → NP_611784.2  CG9875, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MSH5
      Related
      FBpp0071915, FBtr0072006

    2. NM_001169791.1 → NP_001163262.1  CG9875, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MSH5
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA AY118813.1 AAM50673.1
    genomic AE013599.4 ACZ94534.1
    genomic AE013599.4 AAF46986.2
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MSH5.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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