U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Fib Fibrillarin [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37662, updated on 11-Apr-2024

Summary

Official Symbol
Fibprovided by FlyBase
Official Full Name
Fibrillarinprovided by FlyBase
Primary source
FLYBASE:FBgn0003062
Locus tag
Dmel_CG9888
See related
AllianceGenome:FB:FBgn0003062
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG9888; dFib; Dmel\CG9888; fib; Fibri; fibrillarin; GCR-6; GCR6; pen59C5; Pen59C5
Summary
Predicted to enable RNA binding activity; histone-glutamine methyltransferase activity; and rRNA methyltransferase activity. Predicted to be involved in box C/D RNA 3'-end processing; histone glutamine methylation; and rRNA methylation. Located in Cajal body and nucleolus. Is expressed in several structures, including embryonic/larval midgut; embryonic/larval muscle cell; extended germ band embryo; gonad; and visceral muscle primordium. Orthologous to several human genes including FBL (fibrillarin). [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
59C3-59C3; 2-102 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (23072909..23074725, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18960432..18962248, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene transfer RNA:Serine-TGA 1-1 Neighboring gene transfer RNA:Serine-TGA 2-1 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Arginine methyltransferase 7 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables histone H2AQ104 methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables rRNA methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in box C/D sno(s)RNA 3'-end processing IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in rRNA methylation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in Cajal body IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in Cajal body IDA
Inferred from Direct Assay
more info
PubMed 
part_of box C/D methylation guide snoRNP complex IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in dense fibrillar component ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleolus IDA
Inferred from Direct Assay
more info
PubMed 
part_of small-subunit processome IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
fibrillarin
Names
CG9888-PA
Fib-PA
NP_523817.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    23072909..23074725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079093.4NP_523817.1  fibrillarin [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_523817.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q24348, Q8IGK5, Q9W1V3
    UniProtKB/TrEMBL
    E4NKN3
    Related
    FBpp0071892
    Conserved Domains (1) summary
    PTZ00146
    Location:109344
    PTZ00146; fibrillarin; Provisional