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    C5orf25 chromosome 5 open reading frame 25 [ Homo sapiens ]

    Gene ID: 375484, updated on 11-May-2012
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    Summary

    Official Symbol
    C5orf25provided by HGNC
    Official Full Name
    chromosome 5 open reading frame 25provided by HGNC
    Primary source
    HGNC:24779
    See related
    Ensembl:ENSG00000170085; HPRD:13486; Vega:OTTHUMG00000130663
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    OOMA1; FLJ44216; FLJ56998; MGC33586; MGC40402; MGC90345
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    Genomic context

    Location :
    5q35.2
    Sequence :
    Chromosome: 5; NC_000005.9 (175665370..175772992)
    See C5orf25 in Epigenomics, MapViewer

    Chromosome 5 - NC_000005.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100507397 Neighboring gene selenophosphate synthetase 1 pseudogene 3 Neighboring gene centrosomal protein 192kDa pseudogene Neighboring gene BRCA1/BRCA2-containing complex, subunit 3 pseudogene Neighboring gene KIAA1191 Neighboring gene microRNA 1271 Neighboring gene ADP-ribosylation factor-like 10

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Systematic and quantitative assessment of the ubiquitin-modified proteome. Kim W, et al. Mol Cell, 2011 Oct 21. PMID 21906983.
    2. A directed protein interaction network for investigating intracellular signal transduction. Vinayagam A, et al. Sci Signal, 2011 Sep 6. PMID 21900206.
    3. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. Wagner SA, et al. Mol Cell Proteomics, 2011 Oct. PMID 21890473.
    4. A human MAP kinase interactome. Bandyopadhyay S, et al. Nat Methods, 2010 Oct. PMID 20936779.
    5. A human protein-protein interaction network: a resource for annotating the proteome. Stelzl U, et al. Cell, 2005 Sep 23. PMID 16169070.

    See all (9) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Phenotypes

    Review eQTL and phenotype association data in this region using PheGenI

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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    Q8NDZ2 P68366 TUBA4A    HPRD  PubMed  
    BioGRID:131981 BioGRID:107843 CSNK2B    BioGRID  PubMed Two-hybrid 
    BioGRID:131981 BioGRID:119699 DNAJB11    BioGRID  PubMed Two-hybrid 
    BioGRID:131981 BioGRID:111362 PLK1    BioGRID  PubMed Two-hybrid 
    BioGRID:131981 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:131981 BioGRID:113364 YWHAG    BioGRID  PubMed Two-hybrid 
    BioGRID:131981 BioGRID:113366 YWHAZ    BioGRID  PubMed Two-hybrid 
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    General gene information

    Markers

    Genotypes

    Homology

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    General protein information

    Preferred Names
    uncharacterized protein C5orf25
    Names
    uncharacterized protein C5orf25
    oocyte maturation associated 1
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    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198567.4 → NP_940969.3  uncharacterized protein C5orf25

      Status: VALIDATED

      Source sequence(s)
      BC066980, BC073880
      Consensus CDS
      CCDS4398.2
      UniProtKB/Swiss-Prot
      Q8NDZ2
      Related
      ENSP00000342075, ENST00000341199

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000005.9 Reference GRCh37.p5 Primary Assembly

      Range
      175665370..175772992
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000137.1 Alternate HuRef

      Range
      170595692..170595963
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AC138956.3 (79242..99306) None
    genomic AC139493.3 (86042..173606) None
    mRNA AK126204.1 None
    mRNA AK299336.1 BAG61339.1
    mRNA BC032390.1 AAH32390.1
    mRNA BC037298.1 AAH37298.1
    mRNA BC066980.1 AAH66980.1
    mRNA BC073880.1 AAH73880.1
    mRNA BX390643.2 None
    mRNA DC372557.1 None
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8NDZ2.2 GenPept UniProtKB/Swiss-Prot:Q8NDZ2
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
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